| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0185 |
|---|
| Symbol | |
|---|
| ID | 6183947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 166393 |
|---|
| End bp | 167622 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641670905 |
|---|
| Product | cell division protein FtsA |
|---|
| Protein accession | YP_001797104 |
|---|
| Protein GI | 171462991 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0849] Actin-like ATPase involved in cell division |
|---|
| TIGRFAM ID | [TIGR01174] cell division protein FtsA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000415608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 0.589058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG ACAATCGCGA TATTTTGGTT GGTTTAGATA TTGGAACTTC CAAGGTGGTT
GCCTTGGTTG CTGAATTAGC GCCTGATGGT CAATTTAATG TAGTTGGTGT TGGTCAAACA
GCATCTAAGG GATTAAAGAA AGGCGTTGTA GTCAATATTG AGGCTACCGT CCAATCGATT
CAAAAGGCCC TTGAGGAGGC TGAGGTCATG GCTGATCGCC AGATCGTCCA AGTCTTTACA
GGCATTGCTG GCAATCACAT CGTGAGCTTT AACTCCAGTG GCATGGTGGC TATACGGGAT
AAGGAAGTTG GTGCCGGAGA TGTAGAGCGC GTTCTAGAGA CAGCAAAAGC GATCAATATT
CCAACAGACC AACAGATTTT GCATATCCTA GTTCAAGAAT TCATCATTGA TGGTCAAGAA
GATGTGCGTG AGCCAATCGG CATGAGTGGT CTGCGCTTAG AGGTGAAGGT ACACATTGTT
ACTGGTGCTG TGAGTGCTGC ACAAAATATT GTGAAGTGTG TACGTCGTTG CGGTCTTGAA
GTAAATGATT TGATTTTGCA GCCTTTAGCC TCAAGCTTAG CGGTCTTAAC TGAAGACGAA
AAAGAGCTTG GCGTGGTATT GGTCGATATC GGCGGAGGAA CAACTGATAT TGCGATTTAT
TGCCAGGGCT CTATTCGTCA TACCGCAGTG ATTCCAATTG CAGGTGATCA AATTACCAAT
GACATCACAA TGGCATTGCG TACACCAACA ATCGATGCTG AAGATTTGAA GATTGCGCAT
GGTATCGCTC GACAAGATAT GGCTGATCCA ACCGCAATGA TTGATGTTCC TGGTGTTGGT
GATCGTGAGC CACGTCCGAT GTCTAAGCAG GCTCTAGCGG CAGTGATTGA ACCTCGTGTA
GAAGAGTTAT TTACGCTCGT AAGAGGTGTA GTGCGTGACT CCGGTTGCGA GGATGTGGTT
TCTTCCGGAA TTGTTTTGAC TGGCGGCACT GCGCTAATGC CCGGCATGGT GGAGTTAGCC
GAGCAGGTCT TTTTAAGACC AGCCCGCATT GGCACTCCGG AATACCGTGG GCATTTGCAT
GAAGTTTTAC GTAGTCCAAG ATACGCCACC AGCATAGGTT TGCTGATGGA AGGTCAAGCA
CAGTTATTGC GTGGTCGTCG TGTTTCTCAA TCAGGCGCGT TACAAGGAGT AATTACGCGT
ATGAAGGAAT GGTTTGCAGG AAATTTTTAA
|
|---|
| Protein sequence | MSKDNRDILV GLDIGTSKVV ALVAELAPDG QFNVVGVGQT ASKGLKKGVV VNIEATVQSI
QKALEEAEVM ADRQIVQVFT GIAGNHIVSF NSSGMVAIRD KEVGAGDVER VLETAKAINI
PTDQQILHIL VQEFIIDGQE DVREPIGMSG LRLEVKVHIV TGAVSAAQNI VKCVRRCGLE
VNDLILQPLA SSLAVLTEDE KELGVVLVDI GGGTTDIAIY CQGSIRHTAV IPIAGDQITN
DITMALRTPT IDAEDLKIAH GIARQDMADP TAMIDVPGVG DREPRPMSKQ ALAAVIEPRV
EELFTLVRGV VRDSGCEDVV SSGIVLTGGT ALMPGMVELA EQVFLRPARI GTPEYRGHLH
EVLRSPRYAT SIGLLMEGQA QLLRGRRVSQ SGALQGVITR MKEWFAGNF
|
|---|
| |