| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0182 |
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| Symbol | murC |
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| ID | 6184062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 163086 |
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| End bp | 164522 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670902 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_001797101 |
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| Protein GI | 171462988 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0120552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.632755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCATA TTGTTCAGCA AATTCATTTC ATTGGCATTG GTGGTGCTGG TATGAGCGGT
ATTGCTGAAG TGCTTCTGAA CTTAGGTTAC CAAGTTTCGG GATCAGATTT GGCTGAGGGA
GCTGTTACCA AGCGCTTGAA AGGATTAGGC GTCGTGATTC ACATTGGACA TGATCCGAAG
AACATCGGCA CTACTGAGGC GGTAGTAATT TCAACAGCGG TTGCTGGCAA TAATCCAGAA
GTGCTGGCTG CGCGTGCGGC AAAGATTCCA GTCATACAGC GTGCTGTCAT GTTGGGCGAA
TTAATGCGCT TAAAACAAGG TATTGCAATT GCTGGTACAC ATGGCAAAAC AACCACTGCT
AGCTTAGTTG CGTCAGTTTT AGCTGAGGGT GGTCTAGATC CGACATTTGT GATTGGGGGG
AAATTAAATT CCGCTGGTGC TAATGCTCGT TTAGGGCGTG GCGACTTTAT TGTTGTTGAG
GCGGATGAAT CTGATGCTTC TTTCTTGCAG TTATTTCCAG CGATGGAAGT GGTAACCAAT
ATTGATGCTG ATCATATGGA TACGTATCAG CATGACATGG CTCGCTTAAA ACAAGCATTT
GTACAGTTTA TTCAGCGTAT GCCGTTTTAT GGCGTGGCAG TGCTTTGTAT TGATGATGCA
AATGTACGCG ACATTATTCC ATTTGTATCT CAGCCAGTGC TTCGCTACGG TTTATCTGAC
GATGCGGATA TTCGCGCAGC TAATGTCCGT GCTGATGGTA CTCGCATGCA TTTCACGGTT
GATCGTCGCA CTGTTCGTAG GCATGGCAAT AAGCCTGGAC CACTCAATAT CACACTGAAC
TTGCCAGGCT TGCATAACGT ACGCAATGCA TTAGCTGCGA TTGGTATCGC AACTGAGCTG
GGTGTGGGTG ATGAGGCAAT CACAAAGGCT CTTTCAGAGT TTGGCGGTGT TGGCCGTCGC
TTCCAACGAT ACGGGGAAAT ACCCTTGGAC TCAGGTGGTA GCTTTACCTT GATTGATGAT
TATGGACACC ATCCAGTAGA GATGTCGGCA ACCTTGGCAG CTGCTCGGGG CGCTTATCCA
GATCGTCGTT TGGTGCTGGC ATTCCAGCCT CATCGTTACA CCAGAACTCG CGATTGCTTT
GGTGAGTTTG TTCAGGTCCT TCGAAGTTTT GACGCTTTGG TGTTGACTGA TGTCTACCCA
GCAGGTGAAG CAAAAATTCC AGGAGCAGAT GGTAAGAGCC TGATGAAGGC CGCTATCGCA
GAAGAGAAGA ATTCAAAAGC CTTATTAAAT TCAGCGGCAG TTGCCTATGC AGCAAGCATT
ACGGAGATGC CAGAAAAATT GCGTCAAGTT TTAAAAGATG GGGATGTATT AATTACGATG
GGTGCAGGTT CAATTTTTGC TTTGCCACAT ACGTTGTCGG AGGCAAAGCA TGTTTAA
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| Protein sequence | MKHIVQQIHF IGIGGAGMSG IAEVLLNLGY QVSGSDLAEG AVTKRLKGLG VVIHIGHDPK
NIGTTEAVVI STAVAGNNPE VLAARAAKIP VIQRAVMLGE LMRLKQGIAI AGTHGKTTTA
SLVASVLAEG GLDPTFVIGG KLNSAGANAR LGRGDFIVVE ADESDASFLQ LFPAMEVVTN
IDADHMDTYQ HDMARLKQAF VQFIQRMPFY GVAVLCIDDA NVRDIIPFVS QPVLRYGLSD
DADIRAANVR ADGTRMHFTV DRRTVRRHGN KPGPLNITLN LPGLHNVRNA LAAIGIATEL
GVGDEAITKA LSEFGGVGRR FQRYGEIPLD SGGSFTLIDD YGHHPVEMSA TLAAARGAYP
DRRLVLAFQP HRYTRTRDCF GEFVQVLRSF DALVLTDVYP AGEAKIPGAD GKSLMKAAIA
EEKNSKALLN SAAVAYAASI TEMPEKLRQV LKDGDVLITM GAGSIFALPH TLSEAKHV
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