Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0111 |
Symbol | |
ID | 6184166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 102468 |
End bp | 103226 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641670844 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_001797044 |
Protein GI | 171462931 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.580692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAACCA AGAGAATTAT CCCTTGCCTC GACGTTACTG CAGGGCGTGT AGTTAAAGGC GTGAACTTTG TCGGTTTGCG TGATGCAGGT GACCCTGTAG AGATTGCAAA ACGATATGAC ACGCAAGGTG CAGACGAGCT AACTTTCTTA GACATTACTG CCACATCTGA TGGGCGCGAT CTCATATTGC ACATCATTGA AGACGTCGCA TCACAAGTGT TTATTCCATT GACTGTTGGT GGCGGCGTTC GCACAGTTGC AGATGTGCGT CGCCTGCTCA ATGCCGGCGC AGATAAAGTG AGCATGAATT CTTCCGCAGT AGCCAATCCT GATTTGGTTT CGGATGCCGC TGCATACTAT GGTTCCCAAT GTATTGTTGT GGCAATTGAT GCCAAGCAAA CAGAAGCAGG CAACTGGGAA GTATTTACTC ATGGCGGCAG AACAGCTACA GGCATGGATG TAGTTGAATG GGCCAAGGAA GTTGCCAAGC GTGGTGCTGG TGAAATCTTA TTGACCAGCA TCAACCGCGA CGGCAGTAAA GATGGTTTTG ATTTAGCGCT TACCGCAGCG GTAAGTGATG CGGTTTCACT CCCTGTCATT GCTTCCGGTG GGGTGGGTAA TTTGCAGCAT TTAGTCGATG GCATTACTAA AGGCCATGCA GATGCAGTAT TGGCGGCCAG CATTTGTCAC TATAGTGAGT ACACCGTTGG ACAGGCAAAA GAATATATGG CCGCCCAAGG AATTCCGGTT CGGATTTAA
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Protein sequence | MLTKRIIPCL DVTAGRVVKG VNFVGLRDAG DPVEIAKRYD TQGADELTFL DITATSDGRD LILHIIEDVA SQVFIPLTVG GGVRTVADVR RLLNAGADKV SMNSSAVANP DLVSDAAAYY GSQCIVVAID AKQTEAGNWE VFTHGGRTAT GMDVVEWAKE VAKRGAGEIL LTSINRDGSK DGFDLALTAA VSDAVSLPVI ASGGVGNLQH LVDGITKGHA DAVLAASICH YSEYTVGQAK EYMAAQGIPV RI
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