Gene Pnec_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0108 
SymbolhisB 
ID6183093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp100398 
End bp100985 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID641670841 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_001797041 
Protein GI171462928 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.926859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAAG CCGACGTTAC CCGAAATACT TCGGAAACCA AAATTCAGAT TTCCATCAAT 
TTAGATGGTA CCGGTAAGGC TGAACTAGCC TCCGGCGTTC CTTTTCTCGA CCATATGTTG
GATCAAATTG CCCGTCATGG CATGATCGAC CTCAAGGTGG TTGCAAATGG CGATGCTCAT
ATCGATGATC ACCACACTGT TGAAGATGTG GGGATCACCT TAGGCCAAGC ATTTGCCAAG
GCCGTTGGCG ATAAAGTGGG TATTACGCGT TATGGCCATT CTTATGTGCC ATTGGATGAA
ACCCTTTCCC GCATTGTGAT CGATTTCTCT GGGCGCCCAG GTTTGGAATT CAATGTCCCA
TTTACTCGTG CTCGCGTGGG TGACTTTGAT GTGGATCTCA GTATCGAATT CTTCCGTGGT
TTTGTGAACC ATGCGGGAGT CACTTTACAC ATCGACAACT TGCGCGGTAT CAATGCGCAT
CATCAGATCG AAACGGTGTT CAAGGCTTTT GGTCGCGCAT TGCGTATGGC CTTGGCTGTA
GACCCGCGCG CTTCCGGCTC TATTCCATCA ACCAAAGGCA GCCTCTAA
 
Protein sequence
MRQADVTRNT SETKIQISIN LDGTGKAELA SGVPFLDHML DQIARHGMID LKVVANGDAH 
IDDHHTVEDV GITLGQAFAK AVGDKVGITR YGHSYVPLDE TLSRIVIDFS GRPGLEFNVP
FTRARVGDFD VDLSIEFFRG FVNHAGVTLH IDNLRGINAH HQIETVFKAF GRALRMALAV
DPRASGSIPS TKGSL