Gene Pnec_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0100 
Symbol 
ID6184348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp94184 
End bp94441 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content40% 
IMG OID641670836 
Productsulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_001797036 
Protein GI171462923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000362736 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTC TTTTGCCAAA AATCGTTACG CAAGAAAACG CCTTGCGGTT GCAAAAAGAG 
GGTTTGTTAA ATAGTCTCAG CCTGCAATCA ATCGATTGCT CAGCCCTAAA GGATTTTGAT 
TCCACTGTAT TAACGGTTTT ATTGGCATGG CAAAAAAAAC TCAAGACTGA AGGTAAGTCT 
ATTTCTGTTG AGCGCGCACC AGAGAAGTTA AAAGTTTTGG CTGGTGTTTA TGGTGTTGCT 
GCATTACTAG GTTTGTAA
 
Protein sequence
MSFLLPKIVT QENALRLQKE GLLNSLSLQS IDCSALKDFD STVLTVLLAW QKKLKTEGKS 
ISVERAPEKL KVLAGVYGVA ALLGL