| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0098 |
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| Symbol | |
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| ID | 6183297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 92704 |
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| End bp | 93453 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670834 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001797034 |
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| Protein GI | 171462921 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000010266 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTTGG TTCTGCAAAA AATTAAGACG GCAATTTTGC TTGGTCTCGT TGCTGCCATG
GTTGGCTGTG CATCAATACC TGCCGGTGCT GAGCGCTCGC CTCAGGATCC TTGGGAGCCA
TTTAACCGTT CAGTCTTTGA ATTTAATGAA GGATTAGACG CTTATCTTCT CAAACCAGTT
GTTGCGGGTT ATCGTTTTGT GTTGCCTGAA TTTCTGCGCG AGGGGATTTA TAACTTCTTT
AGTAACTACA GCGATATCTA CACCGCCCTT TATAACTTAT TGCAAGGTAA GCCAGACTAC
GTCTTTAGCG ACTTTATGCG TGTGATGGTG AATACCACTA TGGGTTTGGG TGGTCTTCTT
GATATAGCAA CGCCAGGTGG GCTGGAAAAA CACAAAGAAG ATTGGGGTCA AACGTTGGGC
GTTTGGGGCG TGCCCTCTGG ACCATATGTG GTTTTGCCTT TCTTTGGTCC AAGCAATGTG
CGCGATACTT TTGGCACTGT GGCGGATTTA GAGTCGGATT ACTTATTTAG ACTTTTGTCA
GATGTGGCCT TGCGTAATAG TTTGACTGGT TTGCGGGTTG TGAATGCTCG CAATACTTAT
TATGAGGCGG GTGATTTATT AGATGGCGCG GCAATTGATA AGTACAGCTT TATGCGTGAT
GCTTATATTC AAAGACGGGC ATATCAAATC AATGAGGGTC GCGATGATGA GGAGCCTCTC
ATGCCGGTTT ATGAGAATCC ATATCAATAA
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| Protein sequence | MLLVLQKIKT AILLGLVAAM VGCASIPAGA ERSPQDPWEP FNRSVFEFNE GLDAYLLKPV
VAGYRFVLPE FLREGIYNFF SNYSDIYTAL YNLLQGKPDY VFSDFMRVMV NTTMGLGGLL
DIATPGGLEK HKEDWGQTLG VWGVPSGPYV VLPFFGPSNV RDTFGTVADL ESDYLFRLLS
DVALRNSLTG LRVVNARNTY YEAGDLLDGA AIDKYSFMRD AYIQRRAYQI NEGRDDEEPL
MPVYENPYQ
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