| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0081 |
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| Symbol | engB |
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| ID | 6184175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 74946 |
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| End bp | 75611 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670823 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_001797023 |
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| Protein GI | 171462910 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0000989312 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTAAAC TCTTTCAAGC CCGATTCGCC ACCACAGTCA ATGACACCCA TTACCTGCCT
GCCACTCCGC TACGGGAGGT GGCCTTTGCT GGACGCTCAA ACGCGGGTAA ATCCAGCGCC
ATAAATGTCC TTTGCAACCA AAAAAGGCTA GCTTTTGCCA GTAAAACGCC TGGTCGCACC
CAACATATCA ACTATTTTGG TCTTTTTGCC AAAGATGACC TTTTGGCCTA TTTAGTGGAT
TTGCCAGGCT ATGGCTATGC AGCGGTTAAT CATGAGACCA AATACCACTG GAATACCCTC
CTAAGCGATT ATTTGCAAGA ACGAGAGCAA CTGGTGGGCG TGGTCCTCAT TGTGGACTCA
CGCCGCGGCA TCACAGACCT GGACGAGCAA ATGATTGAGT GGTTTGTACC CACTGGCAAG
CCAACTCACG TTTTGCTGAG TAAATGCGAC AAACTCAACA AGAGTGAGTG CAAGCACACC
TTAGAGGCTG TTCGCAAACA ATTACAACAA TACGACCCAG CCTTACCTGA TGGTAATGGC
GAGTCCAAAC AACTTACGGC ACAATTATTT TCAAGCACCA AACGCATCGG CCTGGAAGAG
GCCGACAATA CTGTTATTAA ATGGTTATTT GAAGCAGAGA CTAACGAAGA TGAAATCACC
AACTAA
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| Protein sequence | MSKLFQARFA TTVNDTHYLP ATPLREVAFA GRSNAGKSSA INVLCNQKRL AFASKTPGRT
QHINYFGLFA KDDLLAYLVD LPGYGYAAVN HETKYHWNTL LSDYLQEREQ LVGVVLIVDS
RRGITDLDEQ MIEWFVPTGK PTHVLLSKCD KLNKSECKHT LEAVRKQLQQ YDPALPDGNG
ESKQLTAQLF SSTKRIGLEE ADNTVIKWLF EAETNEDEIT N
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