Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0079 |
Symbol | |
ID | 6183299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 72252 |
End bp | 73925 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641670821 |
Product | Protein-disulfide reductase |
Protein accession | YP_001797021 |
Protein GI | 171462908 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00000987227 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACTAC ATTCTCTTTT GGTGAGAATC TTAGCGCTTG CGCTCTTCCT CTCTGCACAA GTGTTTGCTG CACAAGATTT CTTGCCACCA GAAAAAGCTT TTAGAGCGGA GGCTACTTGG ATAGAAAACT CCAATCAAAT TGAACTTGAA TTTTTGCCCG CCAAAGGCTA TTACATCTAC CAAAATTCTT TGAGGTTCTT GGTAGGCGTT CAGACCGGAA AGCTAAGCAA TATAAGACCC TCGCTACCAT CTGGCGTGGA AAAGTTTGAT GAAACCTTTC AGAAAAAGCT GCAGGTCTAC AAAGACCCAT TTTTAGTTTT TCTAGATATC AAGCCTGTGC TTGGGCAGCC GGTGAATTTA GAGATCACTC TTCAGGGGTG TGCGGAGGCG GGTATTTGTT ATCCACCCAT GACCCTCAAA TTTTTACTTG CTGGGCCTGG GGTAAAAGCC GCTCCAATTC CAGATGTATT GGATGGCGCC CCTTCATCTA ACGTTAAGAC GAATGACCAA TTTAGTTTGG TTGATTTATG GCGTGAGCGC GATGACGTTA ATGCTATTGG CCGCTTTTTG GAAGGCACCT CAACCGCTTA TTTATTTTTA GCTTTCTTTG TTTTGGGTCT GGCTTTGGCA TTTACGCCTT GCGTACTTCC AATGTTGCCT ATTTTGTCGA GCATCATTTT TGGTACCCAG GGTGGCAAAG CGATATCTAA GGGGCGGGCG AGCGTCCTGG CGCTAGCCTA TGTCTTGGGT CTGGCTTTGG TATATGCCTT GGCTGGCGTG CTGATGGCGG CCCTAGGCGG CAGCGTGCAA CGTGCCCTAC AAAGCCCCTT TGCGCTTGCC GTTTTTGCCT TATTGCTATT AACCCTTTCT GGTAGTCTAT TTGGGCTGTA TGACCTGCGC TTACCTCAAT CATGGCATCA CCATGTGGAT AGGCTTGCAG GACGACAAAA GGGCGGTAGT CTGTATGGCG CCTTTGCTTT GGGCGGCATT TCTACGCTAG TGGCTAGCCC TTGTATTACC GCTCCTTTGG CGGGGGTTTT AGCCTTTATT GCGCAAACAG GATCAATGAG TCTGGGCGCA GGCTTGCTAT TTGTTATGGC CCTGGGAATG GGTCTGCCGC TCTTATTTAT CACAGTTGAA GCCCGAATCT TGATTCCGTC TACTGGAATC TGGATGGTAT GGTTGCAACG TACTTTAGGC GTTTTATTGG TTGCTACTGC CGCATGGATT GCTTCGCCAT TGCTAGATCA AAATAATGCC CCTGGAGCTG CCAAAATGCT CAATGGTCAG CGTATTCACC AGGTGGGAGA CTTGTCTTTT GTGGTGATTC AGTCACCGGC ACAGCTAGAG GCTCAATTGA GTAAGGCTAA AGAAGGGAAG AAATTAGTCC TATTAGATTT TTATGCGGAC TGGTGCATCA GTTGCAAAGA AATGGAAATA AGCACATTTG CGAATTCAGA AGTTAGCAAA GAACTAAAGC AGTTTGTTTT ATTGCAAGCT GATGTCACTG CTAACTCACC TGAAAATCAG GCATTGCTCA AGCGTTTTGG TTTGTTTGGA CCTCCAGGTA TTTTGATCTT TAACCAGAAT TCAGAAGAAC AAAAAGATCA ACGTGTGATT GGCTATATGC CACCGCAGCG TTTTATCGAA CGCTTAAAAC AAGCCGCAAA CTAA
|
Protein sequence | MKLHSLLVRI LALALFLSAQ VFAAQDFLPP EKAFRAEATW IENSNQIELE FLPAKGYYIY QNSLRFLVGV QTGKLSNIRP SLPSGVEKFD ETFQKKLQVY KDPFLVFLDI KPVLGQPVNL EITLQGCAEA GICYPPMTLK FLLAGPGVKA APIPDVLDGA PSSNVKTNDQ FSLVDLWRER DDVNAIGRFL EGTSTAYLFL AFFVLGLALA FTPCVLPMLP ILSSIIFGTQ GGKAISKGRA SVLALAYVLG LALVYALAGV LMAALGGSVQ RALQSPFALA VFALLLLTLS GSLFGLYDLR LPQSWHHHVD RLAGRQKGGS LYGAFALGGI STLVASPCIT APLAGVLAFI AQTGSMSLGA GLLFVMALGM GLPLLFITVE ARILIPSTGI WMVWLQRTLG VLLVATAAWI ASPLLDQNNA PGAAKMLNGQ RIHQVGDLSF VVIQSPAQLE AQLSKAKEGK KLVLLDFYAD WCISCKEMEI STFANSEVSK ELKQFVLLQA DVTANSPENQ ALLKRFGLFG PPGILIFNQN SEEQKDQRVI GYMPPQRFIE RLKQAAN
|
| |