Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0070 |
Symbol | |
ID | 6182850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 67149 |
End bp | 68486 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641670812 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_001797012 |
Protein GI | 171462899 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.314815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0000000000414881 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATTAG CACCTACCAA TAACGCAAAC ACTGCAGCAA CGGGCGGCAA GTTTGGCGAA CTCCGCCAAC GCTTAGTCTT CCTGGTGTTG GCTTTGCTCG TGTTCCGTTT AGGTGCTCAC ATTCCAGTCT CTGGAATTGA TCCAGACCAA TTGGCGCAGT TATTTTCCGG TCAAAAAGAC GGCATCTTGG GAATGTTCAA TCTATTCTCA GGCGGCGCTT TATCTCGCTT TACCGTATTT GCCTTGGGAA TCATGCCTTA CATTTCTGCA TCGATCATCA TACAGTTAAT GACGATTGTT ATTCCTTCTT TAGAGTCTTT GAAAAAGGAA GGTCAAGCTG GTCAACGTAA GATTGCTCAG TACACCCGCT ATGGCACAAT GGTATTGGCT ACATTCCAAG CATTGGGTAT TTCTGTTGCC TTGCAAGCAC AGCCTGGTTT AGTTGTTAAC CCCGGCTTGA TGTTTGAACT CAATACTGTA GTGACTTTGG TAACTGGCAC GATGTTCTTG ATGTGGCTTG GCGAGCAAAT TACCGAGCGC GGTTTGGGTA ACGGTATTTC CATCATTATT TTCGGCGGTA TTGTTTCCGG CCTGCCAAAT GCATTGGCAA GCTTGCTGGA GCTGGTTCGT ACTGGTTCAA TGAATATTGT TTCTGCCTTG CTGATTGTGG TGATTTGCGT AGCAGTAACT TATTTTGTGG TGTTTGTAGA GCGTGGTCAG CGTCGCATCT TGGTGAACTA TGCTAAGCGT CAAGTTGGTA ACAAGATTTA CGGTGGCCAG TCTTCCTACT TCCCGTTGAA GTTAAATATG GCTGGCGTTA TCCCTCCAAT TTTTGCTTCC TCTATTATTT TGTTCCCTGC AACGATTGCT GGCTGGTTTA CATCAGGCGA GCCAACCAAT ATGTTTAGCA GAATTATTAA AGACTTAGCC GCTACTTTGG CTCCAGGTCA ACCTGTGTAC ACCATTTTGT ATGCAGCTGC GATTATTTTC TTCTGTTTCT TCTATACCGC ATTGGTATTT AACAGCCGTG AGACTGCTGA GAATTTGAAG AAGAGTGGCG CATTCGTTCC AGGCATTCGT CCGGGCGATC AAACAGCCCG TTATATCGAT AAGATCTTGG TGCGTTTGAC TCTAGCTGGC TCTATTTATA TGGTTCTGGT TTGCTTATTA CCAGAATTCT TGGTGTTGAA GTACAACGTG CCGTTTTATT TTGGCGGTAC TTCATTGTTG ATTATTGTTG TTATTGTAAT GGATTTCATA GCTCAAGTTC AGTCATTTGT TATGCAGCAG CAGTACGGCT CTTTGATGAA AAAAGCCAAT TTTAAGATGG GCGCTTAA
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Protein sequence | MALAPTNNAN TAATGGKFGE LRQRLVFLVL ALLVFRLGAH IPVSGIDPDQ LAQLFSGQKD GILGMFNLFS GGALSRFTVF ALGIMPYISA SIIIQLMTIV IPSLESLKKE GQAGQRKIAQ YTRYGTMVLA TFQALGISVA LQAQPGLVVN PGLMFELNTV VTLVTGTMFL MWLGEQITER GLGNGISIII FGGIVSGLPN ALASLLELVR TGSMNIVSAL LIVVICVAVT YFVVFVERGQ RRILVNYAKR QVGNKIYGGQ SSYFPLKLNM AGVIPPIFAS SIILFPATIA GWFTSGEPTN MFSRIIKDLA ATLAPGQPVY TILYAAAIIF FCFFYTALVF NSRETAENLK KSGAFVPGIR PGDQTARYID KILVRLTLAG SIYMVLVCLL PEFLVLKYNV PFYFGGTSLL IIVVIVMDFI AQVQSFVMQQ QYGSLMKKAN FKMGA
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