Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0062 |
Symbol | |
ID | 6184163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 63727 |
End bp | 64269 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641670804 |
Product | ribosomal protein L5 |
Protein accession | YP_001797004 |
Protein GI | 171462891 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000145784 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1.96626e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACAC GTTTTCAAGA ACACTATCAG TCTAAAGTAG TTGCAGATTT GATCGCCAAA TTTGGTTACA AGTCTGTAAT GGAAGTTCCA CGTATCACTA AGGTAACCCT GAACATGGGT TTAGGTGATG CGGTGAACGA CAAGAAAATT ATCGAAAATG CAGTTGGCGA TTTAACTAAA GTTGCAGGCC AAAAGCCAGT TGTAACTAAA GCGAAAAAAG CGATTGCAGG ATTCAAAATT CGTCAAGGCT ACCCAATCGG CGCCATGGTG ACATTGCGTA GTTCACGCAT GTACGAATTT TTGGATCGTT TCGTTACTGT TGCATTGCCA CGCGTACGCG ACTTCCGCGG TATTTCTGGT AAAGCATTTG ATGGCCGTGG TAACTACAAC ATCGGCGTTA AAGAACAGAT CATTTTCCCT GAAATCGAAT ACGATAAAAT TGATGCCCTT CGTGGTCTCA ATATCAGTAT TACGACGACT GCCAAGACCG ACGAAGAAGC AAAAGCTTTG TTGGCGGCAT TCAAATTCCC TTTCCGCAAT TAA
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Protein sequence | MSTRFQEHYQ SKVVADLIAK FGYKSVMEVP RITKVTLNMG LGDAVNDKKI IENAVGDLTK VAGQKPVVTK AKKAIAGFKI RQGYPIGAMV TLRSSRMYEF LDRFVTVALP RVRDFRGISG KAFDGRGNYN IGVKEQIIFP EIEYDKIDAL RGLNISITTT AKTDEEAKAL LAAFKFPFRN
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