Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0059 |
Symbol | rpsQ |
ID | 6183281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 62571 |
End bp | 62840 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641670801 |
Product | 30S ribosomal protein S17 |
Protein accession | YP_001797001 |
Protein GI | 171462888 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0186] Ribosomal protein S17 |
TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000129273 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1.52646e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGAAT TATCTAAGCC CTTGCGCCGC ACCCTAGTGG GACGCGTTGT TAGCGACAAA ATGCAAAAAA CTGTGACGGT GTTGGTTGAG CGTCAAGTTA AGCATCCAGT GATTGGTAAG TACGTTGGCC AGTCTAAAAA GTACCACGCT CATGACGAAG CTGGCACATA CAAGATGGGT GATACCGTTG AAATTGCTGA ATCTAAGCCA ATTTCTCGCA CTAAATCTTG GGTTGTGACC CGTTTGGTAG AAGCTTCAAA GGGTATTTAA
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Protein sequence | MTELSKPLRR TLVGRVVSDK MQKTVTVLVE RQVKHPVIGK YVGQSKKYHA HDEAGTYKMG DTVEIAESKP ISRTKSWVVT RLVEASKGI
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