Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0057 |
Symbol | rplP |
ID | 6183277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 61936 |
End bp | 62349 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641670799 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_001796999 |
Protein GI | 171462886 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000274594 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 4.45125e-19 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTACAAC CAAAGCGTCG CAAGTATCGT AAGGAACAAA AAGGCCGTAA CACTGGCGTG GCAACACGCG GTAGTTCTGT AGCCTTTGGT GACTTTGGAT TGAAGGCCGT TGGCCGTGGT CGTTTGACTG CTCGTCAAAT TGAGTCAGCA CGTCGTGCAA TGACTCGTCA CATTAAACGT GGTGGCCGTA TTTGGATTCG CATTTTCCCA GATAAGCCAA TTTCACAAAA ACCTGCTGAA GTACGTATGG GTAACGGTAA AGGTAATCCA GAGTACTACG TAGCTGAAAT TCAACCAGGC AAAGTGTTAT ACGAGATGGA CGGTGTTGAT GAGCAATTAG CGCGTGAAGC TTTCAAGCTT GCAGCTGCTA AGTTGCCTTT ACAGACCACT TTCGTGATTC GCCACTTAGG TTGA
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Protein sequence | MLQPKRRKYR KEQKGRNTGV ATRGSSVAFG DFGLKAVGRG RLTARQIESA RRAMTRHIKR GGRIWIRIFP DKPISQKPAE VRMGNGKGNP EYYVAEIQPG KVLYEMDGVD EQLAREAFKL AAAKLPLQTT FVIRHLG
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