| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0056 |
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| Symbol | |
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| ID | 6183276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 61118 |
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| End bp | 61933 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670798 |
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| Product | ribosomal protein S3 |
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| Protein accession | YP_001796998 |
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| Protein GI | 171462885 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000180668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1.0517300000000001e-18 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGACAAA AGATAAACCC AACCGGATTC CGACTCGCGG TAACGAAGAA TTGGACATCA
CGTTGGTATG CAAACAATAC TGACTTCGCA AAGATGCTGA AAGAGGACGT AGATGTCCGT
AGCTATCTCA AGAAGAAATT GAAGAATGCA TCCGTAAGTA AAGTAGTGAT TGAGCGTCCT
GCAAAGAGCG CACGTATCAC CATCTATAGC TCACGTCCAG GCGTTGTAAT CGGTAAAAAA
GGTGAAGATA TTGAAGTGCT CCGTCGAGAA TTACAAAAGC GCATGGGCGT TCCGGTTCAC
GCAAATATCG AAGAAATTCG CAAGCCTGAA GTTGATGCGC AATTGATCGC TGACTCTATT
ACTCAGCAGT TAGAGAAGCG CATTATGTTC CGCCGTGCAA TGAAGCGCGC AATGCAAAAA
GCAATGCGTT TAGGCGCACA AGGTATCAAG ATCATGTCGT CAGGTCGTTT GAATGGCGCT
GAAATTGCTC GTCGCGAATG GTACCGTGAA GGCCGCGTTC CACTTCATAC CTTGAAGGCT
GATATTGATT ACGCAACTTC TGAAGCGGAA ACAACATACG GCATTATCGG CGTAAAAGTT
TGGGTATACA AGGGCGACGC ATTGGGTCGT GGTGCAGAAG CTCAAGTTGC TGCACAAGTT
GCCGAAGAAA AGAAAACTCG TCGTGCTCCA AGCAAGACAG CTGCTCGCAA ACCAGCTGTT
GGCACAGACA AGCCATTAGT TGCTGCTAAA CCAGCAGTAA AGCGTGTGCG TAAGGTTGAA
ACACCTGCCG CAGATACGCA GAAGTCAGGA GAGTAA
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| Protein sequence | MGQKINPTGF RLAVTKNWTS RWYANNTDFA KMLKEDVDVR SYLKKKLKNA SVSKVVIERP
AKSARITIYS SRPGVVIGKK GEDIEVLRRE LQKRMGVPVH ANIEEIRKPE VDAQLIADSI
TQQLEKRIMF RRAMKRAMQK AMRLGAQGIK IMSSGRLNGA EIARREWYRE GRVPLHTLKA
DIDYATSEAE TTYGIIGVKV WVYKGDALGR GAEAQVAAQV AEEKKTRRAP SKTAARKPAV
GTDKPLVAAK PAVKRVRKVE TPAADTQKSG E
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