| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0047 |
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| Symbol | |
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| ID | 6183272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 54074 |
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| End bp | 56176 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670789 |
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| Product | elongation factor G |
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| Protein accession | YP_001796989 |
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| Protein GI | 171462876 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000029839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 6.96868e-24 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCACGTA AAACCCCTAT CGACAAATAC CGCAATATTG GTATTTCTGC ACACATTGAC
GCAGGCAAAA CAACAACTAC AGAACGTGTT TTGTTCTACA CCGGTGTTAA TCATAAGATT
GGTGAAGTTC ATGACGGTGC TGCAACCATG GACTGGATGG AGCAGGAGCA AGAGCGTGGT
ATCACGATTA CTTCTGCTGC TACTACAACA TTCTGGAAGG GCATGGCGGG CAATATGCCA
GAGCACCGCA TCAATATTAT TGATACTCCA GGACACGTAG ACTTCACTAT TGAAGTTGAG
CGTTCAATGC GCGTTTTGGA TGGCGCTTGC ATGGTTTACT GTGCGGTAGG TGGTGTGCAG
CCACAATCTG AAACTGTGTG GCGTCAAGCT AATAAATACC AAGTTCCACG CTTGGCGTTT
GTAAACAAGA TGGATCGTAC GGGCGCGAAC TTCTTCAAAG TTTACGAACA GATGAGAACT
CGCCTCAAGG CAAACCCAAT CTTGATTCAA ATTCCTATTG GCGCAGAAGA AAACTTCAAG
GGCGTTGTGG ATTTGGTCAA AATGAAGGCT GTGTATTGGG ATGAAGCTTC ACAAGGCACC
AAATTTACCT ATGAAGATAT CCCAGTCGAA TTACAAGCTT CCGCTGAAGA GTGGTGCGAG
AAGATGCTTG AAGCTGCCGC TGAAAGCTCT GAAGAGTTGA TGGAAAAATA TCTCGGCGGT
GAAGGCTTGA CCGAAGAGGA AATCAAAAAA GCATTGCGTC AACGCACTAT TGCTAACGAA
ATCGTTCCAA TGTTGTGTGG AACAGCATTT AAAAACAAAG GCGTTCAGGC GATGTTGGAT
GCTGTGGTTG AGTTGTTGCC ATCACCATTA GATGTGCCAC CGGTTCCTTG CGAATTGGAA
GACGGCACTC CTGCAGTTCG TAAAGCGTCT GATGATGAGA AATTCTCTGC ATTGGCATTT
AAGATCATGA CTGACCCATT CGTTGGTCAG CTCATCTTCT TCCGCGTTTA CTCAGGCGTG
ATGAAGTCTG GTGACACCAT CTATAACCCG ATTAAGGGCA AAAAAGAGCG TGTTGGTCGC
TTGCTGCAAA TGCACGCTAA CGAGCGTGAA GAAATTAAAG AAGTTTTTGC AGGCGATATC
GCAGCGGCTG TTGGTCTCAA AGACGCAACT ACTGGTGAAA CATTGTGTGA TCCAGACAGC
ATCGTTGTTT TGGAGCGCAT GGTATTCCCA GAGCCAGTGA TCTCCCAAGC TGTTGAGCCA
AAGACCAAAG CTGACCAAGA GAAGATGGGC TTTGCATTGA ATCGCTTGGC ACAAGAAGAC
CCTTCTTTCC GCGTGAAGAC TGACGAAGAA TCAGGCCAAA CCATTATTTC CGGCATGGGC
GAGCTCCACT TGGAAATTTT GGTTGATCGT ATGAAGCGTG AATTCGGTGT TGAAGCAACT
GTTGGTAAAC CTCAGGTTGC GTACCGTGAA ACGATTCGCA AGACTTGTGA CGAAGTTGAA
GGTAAGTTCG TTAAGCAGTC TGGTGGTCGT GGTCAATATG GTCACGTTGT ATTGAAACTT
GAGCCACAAG CTCCAGGTAA AGGCTTTGAA TTCGTTGATG CTATTAAGGG CGGTGTAGTT
CCCCGTGAAT ATATCCCTGC AGTAGAAAAA GGCATTATCG AAACATTGAA CTCCGGTGTC
TTGGCTGGTT ACCCAGTTGT AGATGTCAAG GCAACATTAT TCTTCGGTTC ATATCATGAT
GTTGACTCCA ATGAAAACGC ATTTAAGATG GCGGGTTCTA TGGCGTTCAA AGATGGTATG
CGCAAAGCAG CCCCTGTGTT GCTTGAGCCG ATGATGGCTG TTGAGGTAGA AACACCAGAA
GATTTCATGG GTAACGTAAT GGGCGACTTC TCATCACGTC GCGGTATTTT GCAAGGTATG
GATGACATTC CAGGCGGTGG CAAGATTGTT CGTGCTGAAG TGCCATTAGC GGAGATGTTT
GGCTACTCGA CTGGCTTGCG CTCGTTGACC CAAGGTCGCG CTACTTACAC CATGGAATTT
AAGCATTACG CAGAAGCACC TAAAAACGTA GCAGAAGCAG TTATGGCCGC TAAAGCGAAG
TAA
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| Protein sequence | MARKTPIDKY RNIGISAHID AGKTTTTERV LFYTGVNHKI GEVHDGAATM DWMEQEQERG
ITITSAATTT FWKGMAGNMP EHRINIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ
PQSETVWRQA NKYQVPRLAF VNKMDRTGAN FFKVYEQMRT RLKANPILIQ IPIGAEENFK
GVVDLVKMKA VYWDEASQGT KFTYEDIPVE LQASAEEWCE KMLEAAAESS EELMEKYLGG
EGLTEEEIKK ALRQRTIANE IVPMLCGTAF KNKGVQAMLD AVVELLPSPL DVPPVPCELE
DGTPAVRKAS DDEKFSALAF KIMTDPFVGQ LIFFRVYSGV MKSGDTIYNP IKGKKERVGR
LLQMHANERE EIKEVFAGDI AAAVGLKDAT TGETLCDPDS IVVLERMVFP EPVISQAVEP
KTKADQEKMG FALNRLAQED PSFRVKTDEE SGQTIISGMG ELHLEILVDR MKREFGVEAT
VGKPQVAYRE TIRKTCDEVE GKFVKQSGGR GQYGHVVLKL EPQAPGKGFE FVDAIKGGVV
PREYIPAVEK GIIETLNSGV LAGYPVVDVK ATLFFGSYHD VDSNENAFKM AGSMAFKDGM
RKAAPVLLEP MMAVEVETPE DFMGNVMGDF SSRRGILQGM DDIPGGGKIV RAEVPLAEMF
GYSTGLRSLT QGRATYTMEF KHYAEAPKNV AEAVMAAKAK
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