| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0041 |
|---|
| Symbol | rplL |
|---|
| ID | 6184050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 43887 |
|---|
| End bp | 44264 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641670783 |
|---|
| Product | 50S ribosomal protein L7/L12 |
|---|
| Protein accession | YP_001796983 |
|---|
| Protein GI | 171462870 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0222] Ribosomal protein L7/L12 |
|---|
| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0709556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00000000000056539 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTA CTAAAGAAGA AATCATTGAA GCAGTAGGTA GCATGTCCGT TATGGATTTG
AACGACTTGG TTAAAGCGTT CGAAGAGAAG TTTGGTGTTT CAGCTGCAGC GATGGCTGTT
GTTGGTCCTG CAGGCGCTGG CGGTGGTGAT GCTGGTGGTG CAGAGCAAAC TGAATTCACA
GTAAACCTCG TTGAAGCTGG CGCAAACAAA GTTTCAGTAA TTAAGGCAGT TCGTGAAATT
ACTGGTCTTG GTTTGAAAGA AGCGAAAGAT TTGGTTGACG GAGCGCCTAA GCCAATCAAA
GAAGGCGTTG ATAAGAAAAC TGCTGAAGAA GCTAAGAAGA AGCTTGAAGA AGCTGGCGCT
AAAGCAGAAC TCAAGTAA
|
|---|
| Protein sequence | MAITKEEIIE AVGSMSVMDL NDLVKAFEEK FGVSAAAMAV VGPAGAGGGD AGGAEQTEFT
VNLVEAGANK VSVIKAVREI TGLGLKEAKD LVDGAPKPIK EGVDKKTAEE AKKKLEEAGA
KAELK
|
|---|
| |