| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0038 |
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| Symbol | rplK |
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| ID | 6184123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 41939 |
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| End bp | 42370 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670780 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001796980 |
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| Protein GI | 171462867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000123599 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000000000171978 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAAAAA AGATTATTGG CTTTATTAAG CTGCAGATCC CTGCAGGTAA AGCAAATCCA
TCACCACCCG TAGGTCCAGC ATTGGGTCAA CGCGGTCTTA ACATTATGGA ATTCTGTAAG
GCGTTTAATG CTCAAACTCA GAGCATGGAA CCTGGCCTGC CAATTCCAGT CGTGATTACA
GCGTTTGCTG ATAAGAGCTT CACATTCATC ATGAAGACTC CTCCAACAAC CATCATGATT
AAGAAAGCTG CAAAGATCGA AAAGGGATCA CCACGTCCCC ATACCGATAA GGTTGGCTCA
ATTACTCGTG CTCAAGCGGA AGAAATCGCT AAAGCAAAAA TGCCAGACTT GACAGCAGCC
GATATGGATG CAGCTGTTAG AACAATCGCT GGTAGCGCCC GTTCCATGGG CATCACTGTG
GAAGGTTTCT AA
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| Protein sequence | MAKKIIGFIK LQIPAGKANP SPPVGPALGQ RGLNIMEFCK AFNAQTQSME PGLPIPVVIT
AFADKSFTFI MKTPPTTIMI KKAAKIEKGS PRPHTDKVGS ITRAQAEEIA KAKMPDLTAA
DMDAAVRTIA GSARSMGITV EGF
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