| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0036 |
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| Symbol | |
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| ID | 6184095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 40812 |
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| End bp | 41189 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670778 |
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| Product | preprotein translocase, SecE subunit |
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| Protein accession | YP_001796978 |
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| Protein GI | 171462865 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000011246 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000000000049909 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTCATC AAACAGCAAG TCATACTGAA GAAAAAAGCG GTTGGGTCTC CGGACTCGCT
GTTTTAATCG TCGTTGCAGC GTTAGTTCTT TACTACACGT TGGTGGACCA ATCTATGTTG
GTTCGTTTGG TTGTTTTGTT TGGCGGCATT GCGGCTGCAG TTTTAATTGT GGCGATTTCA
CCGGCTGGGC GTCGCTTTAT CGCCTATACC AAAGATTCTT GGTATGAAGT AAAAAAGGTT
GTTTGGCCAA CTCGTAAAGA GACCGCCCAG ATGACTCTAG TCGTATTTGG CTTTGTTCTG
ATCATGTCCT TGTTTTTGTG GATTGCAGAC AAATTGATTG AATGGCTAGT TTTTTCAGTC
TTTTTGGGCT GGAAGTGA
|
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| Protein sequence | MSHQTASHTE EKSGWVSGLA VLIVVAALVL YYTLVDQSML VRLVVLFGGI AAAVLIVAIS
PAGRRFIAYT KDSWYEVKKV VWPTRKETAQ MTLVVFGFVL IMSLFLWIAD KLIEWLVFSV
FLGWK
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