| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0032 |
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| Symbol | |
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| ID | 6184096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 31774 |
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| End bp | 32424 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641670766 |
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| Product | transport-associated |
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| Protein accession | YP_001796975 |
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| Protein GI | 171462862 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000573132 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000000102595 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTA CATTCCTTAA AAAATTATTT CTTGCTGCAC TTATCGCATC TCAGATTTCA
GCTTGTGCGG CAGTTGCTGT TGGTGGTGTG GCTGCGAGCG CAACCGTGCT GGCTGATCGT
CGCACACCGG CCGTTCAGGC CATTGATAAA GGAATTGAAT TGGAGACGGA GAATGCGCTA
GCAAAACGCT TTGGTGATAA CGCACATATC AACGTCACCT CGTTTAATCG AAAAGTTTTG
CTGACGGGCG AAGTAAAAGA TGCCGATATT AAAGGCGAGG CAGGGGCATA TGTAAAAGCA
ATGAAGAATG CACGCTCTGT ATTTAACGAA TTAATTATTG GGCCCAACAG TACTTACACC
TCGCGCGCAA ACGACCCCTA TCTAGAGTCT AAGATCAAAA CACAAATGAT CTTTACTGAT
CAGTTGCCAT CGAACTCTAT GGTTATAGTG GCCGAAGGAG GTAGCGTTTA TCTTATGGGA
ATGCTAACGC AGAGCGAAGC GGATCTTGCA AAAAAAGTTG CTAGCAATAC CAATGGCGTA
AAAGATGTTT ACGTTTACTT CGACATTATT TCTGAAGAAG AAAAAGCGCG CCTAGAAAAA
CAAGGCAAGG CCGATCAAAC ACAACCTAAT AGCCCTCCAA AATTTCAATA A
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| Protein sequence | MKITFLKKLF LAALIASQIS ACAAVAVGGV AASATVLADR RTPAVQAIDK GIELETENAL
AKRFGDNAHI NVTSFNRKVL LTGEVKDADI KGEAGAYVKA MKNARSVFNE LIIGPNSTYT
SRANDPYLES KIKTQMIFTD QLPSNSMVIV AEGGSVYLMG MLTQSEADLA KKVASNTNGV
KDVYVYFDII SEEEKARLEK QGKADQTQPN SPPKFQ
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