Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0022 |
Symbol | |
ID | 6184086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 21476 |
End bp | 22876 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641670756 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001796966 |
Protein GI | 171462853 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0274087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.000479158 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAACG GAAATATCGT GCAGTGTATC GGTCCAGTGG TGGACATTCA GTTCCCACGC GACAAAATGC CAAACATTTA TGATGCATTG ACATTAGTTG ATGGCGGCGA AAAATCATTT TCTGAAAAAG GTTTGACCTT TGAAGTTCAG CAACAAATCG GCGACGGCGT AGTTCGTGCG ATTGCCATGG GTGCGAGCGA TGGTTTGCGT CGTGGCATGG AAGTGAAATC TACAGGTAAG CCAATTTCTG TACCAGTTGG TCCAGCAACA TTAGGCCGCA TCATGGACGT TTTAGGACGC CCAATCGATG ACGCAGGTCC GATTGCTACT GAAGAGCGTC GCGCTATTCA CCAGCCAGCA CCTAAGTTTG ATGAGCTCTC CCCCTCTGTT GATTTGCTCG AAACCGGTAT TAAGGTTATC GACTTGGTTT GCCCATTCGC TAAAGGCGGT AAGGTTGGCT TGTTCGGCGG TGCGGGTGTT GGTAAGACCG TGAACATGAT GGAATTGATT AACAACATCG CTAAGCAACA CTCAGGCTTG TCAGTGTTTG CTGGTGTTGG TGAGCGTACT CGTGAAGGTA ATGACTTTTA CCACGAGATG AAAGAATCAA ACGTTATCGA CAAAGTGGCG ATGGTGTTTG GTCAGATGAA CGAGCCTCCT GGCAACCGTT TGCGCGTTGC GTTGACTGGT TTAACAATGG CTGAAGCGTT CCGTGACGAA GGCCGTGACA TTTTGTTCTT CGTTGACAAT ATCTACCGTT ACACATTGGC CGGTACTGAA GTTTCTGCGT TGCTCGGCCG TATGCCTTCT GCTGTGGGTT ACCAACCTAC ATTGGCTGAA GAGATGGGTA AATTGCAAGA ACGTATTACC TCTACAAAGA CTGGTTCTGT TACTTCTATT CAGGCCGTTT ACGTTCCAGC GGATGACTTG ACCGACCCAT CACCAGCTAC AACCTTCTTG CACTTAGATT CCACAGTTGT GTTGTCACGT GACATCGCTG CATTGGGTAT TTACCCAGCG GTTGATCCTT TGGATTCAAC CAGCCGTCAG CTCGATCCAC AAGTGGTTGG TCAAGAGCAT TATGAAGTAG CGCGCGACGT ACAAATGACA TTGCAACGTT ACAAAGAGTT GCGCGATATT ATTGCGATTT TGGGTATGGA CGAATTGTCA CCAGAAGACA AATTGGCCGT ATCACGCGCT CGTAAGATTC AACGTTTCTT GTCCCAGCCT TTCCACGTTG CTGAAGTGTT TACTGGTTCA CCAGGCAAAT ACGTTCCATT GAAAGAAACT ATCCGTGGTT TCAAAATGAT TTGCAGCGGC GAATTGGATC ACTTGCCTGA GCAAGCGTTC TACATGGTGG GTTCAATTGA TGAAGCCATC GAGAAAGCCA AGAAGCTTTA A
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Protein sequence | MSNGNIVQCI GPVVDIQFPR DKMPNIYDAL TLVDGGEKSF SEKGLTFEVQ QQIGDGVVRA IAMGASDGLR RGMEVKSTGK PISVPVGPAT LGRIMDVLGR PIDDAGPIAT EERRAIHQPA PKFDELSPSV DLLETGIKVI DLVCPFAKGG KVGLFGGAGV GKTVNMMELI NNIAKQHSGL SVFAGVGERT REGNDFYHEM KESNVIDKVA MVFGQMNEPP GNRLRVALTG LTMAEAFRDE GRDILFFVDN IYRYTLAGTE VSALLGRMPS AVGYQPTLAE EMGKLQERIT STKTGSVTSI QAVYVPADDL TDPSPATTFL HLDSTVVLSR DIAALGIYPA VDPLDSTSRQ LDPQVVGQEH YEVARDVQMT LQRYKELRDI IAILGMDELS PEDKLAVSRA RKIQRFLSQP FHVAEVFTGS PGKYVPLKET IRGFKMICSG ELDHLPEQAF YMVGSIDEAI EKAKKL
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