| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0004 |
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| Symbol | |
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| ID | 6184220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 5429 |
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| End bp | 5920 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670739 |
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| Product | nuclear protein SET |
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| Protein accession | YP_001796949 |
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| Protein GI | 171462836 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2940] Proteins containing SET domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.494883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0771529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCTA AAAAATTAAA ATCACCAAAG GTGGATAGAT CTTCTATTGT TGTTAAGTCC
TCCCCAATTC ATGGCAAGGG CGTCTTTGTG GCCAAACCAA TTAAAAAAGG CGAAGCAATC
ATTGAATACA AAGGTGAGCG GATTAGCTGG AAGTTGGCCG AAAAGCGCCA CCCACACGAC
CCCAAAGACC CTAATCACAC TTTTTACTTT TCATTAGAAG ACGGTCGTGT AATAGATGCT
AAGTACGGCG GGAATGCAGC GCGCTGGATT AATCACTCAT GTAAGCCAAG TTGCGAAACC
CGTGAAGACA GTTTTAATGG CGAGCCAAGA GTATTTATTT ACGCGAAGCG TGCCCTGAAG
GTTGGTGAGG AGTTGTTTTA TGACTACTCG CTAGATATTG AGGGAAAAAT CACCAAGCAA
ATGAAAAAAG ATTACGAGTG CCGTTGTGGT GCCAAAAAAT GTCGCGGCAC CATGCTCGCT
TTAAAAGACT AG
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| Protein sequence | MASKKLKSPK VDRSSIVVKS SPIHGKGVFV AKPIKKGEAI IEYKGERISW KLAEKRHPHD
PKDPNHTFYF SLEDGRVIDA KYGGNAARWI NHSCKPSCET REDSFNGEPR VFIYAKRALK
VGEELFYDYS LDIEGKITKQ MKKDYECRCG AKKCRGTMLA LKD
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