| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1963 |
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| Symbol | |
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| ID | 6164367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1727137 |
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| End bp | 1730520 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641669126 |
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| Product | DNA-directed RNA polymerase subunit B |
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| Protein accession | YP_001795324 |
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| Protein GI | 171186405 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATC TCCTCCCCCT TCCCGTCATC GTAAGTCAGC AGGACGGGAA GTTCCCCACG
AGAGACGACA GGTGGGTTCT CGTGGAGAGG TTTATAAAAG ACAAGGGGCT TGCTAACCAC
CAGATAAAGT CCTTTAACGA TTTCTTGGAT AAGAAGTTGC CCAAGATAGT GGAGGACTTC
AAGGTGGTTG AGACGGAGAT AAAGGGTCTC AAGTTGGTTC TTGAGCGGAT TGAGGTGGGG
TGGCCCAAGA TTAAGGAGAG CGACGGTTCC GAATCCATAA TATATCCCAT GGAGGCAAGG
TTGCGCAACG CCACGTATTC GGCTCCGCTG TATCTCACCG CGACTCTATA CGTCGACGAC
GAGCCGTATG TCACCGAGAC TTTCTACATC GGCGAGTTGC CGATAATGGT TAAGTCGAAG
AGGTGTAACC TCACCAGGTT GAGGCCTGGC GAGTATATAA AGAAGTTTGA AGATCCGCAG
GACTTCGGCG GCTACTTCAT CATCAACGGG AGCGAGCGGG TGATAATATC CCAGGAGGAT
CTGGTGGCGG ATAGGCCTAT CTACGACAGG GGGGATAAGC CCTCTGTAAA ATACATCGCC
AAGACGATAT CCACAGGCAT AGGGTATAGA AGCACGCTGA CTGTTGAGCT TAACCGAGAC
GGCGTTATCT ACGTCACCCT TTCCGCGATG CCGGTCAAGA TACCGTTCCC GATCTACATG
AAGGCCCTGG GGCTTGAGAC GGACGAAGAC GTCGTCAAGG CCGTGTCCGA CGACCCGGAG
ATCCAGAAGG AGCTTCTGCC GTCTCTCATC GCCGCCAACC AAATAGCGAT TACGAGGGAA
GACGCCCTAG ACTTCATCGG CGGCAAGGTG GCGGTGGGTC AGCCAAAGCC CATTAGGGTA
GAGAAGGCGT ATCAGCTCCT CGACAAGTAC TTCCTCCCGC ATCTGGGCAC TACGACCCCC
GACGAGAAGA GGCAGCAGGA GATTAGGCTT AAGAAGGCGT TGATGTTGGG GCAGATCGTA
AAGGGCTTGG TCGAGTTGCA ACTGGGCCGT AGGAAGCCCG ACGATAAAGA CCATGTTGCC
AACAAGAGGG TTAGGCTAGT CGGCGATTTG ATGACCCAGC TGTTCCGCAC CGTCTTAAAA
CAGTTTCTAC AGGAGCTCAA GAGCCAGCTT GAGAAGTACT ACGCCAGGGG GAGGATACCC
CACATACAGA CGATAGTGAG GCCCGACATC ATCACCGAGC GCGTGAGGCA GGCCTTGGCC
ACCGGCAACT GGGTAGGCGG GAAGACGGGC GTGTCCCAGA TCCTAGACCG CACCAACTAC
ATGTCTACCC TGAGCTACCT CAGGCGGGTG GTGTCGTCGC TGTCTAGGAC CCAGCCTCAC
TTCGAGGCGC GCGACCTACA CCCCACTCAG TGGGGCAGAC TGTGCGCCGT GGAGACCCCG
GAAGGCCAGA ACGTGGGCTT GGTCAAGAAC CTGGCGCTAC TCGCCGAGAT CACCACCGGG
GTAGACGAGG GGGAGGTGGA GCAGTTGCTG TACAACCTGG GCGTGGTGCC TCTGTTGAAG
GCCAGGGAGG AGGGCATCCG CGGCGCCGAA GTCTACATAA ACGGCAGATT GATCGGCGTG
CATCCAAACC CGGAGGAGCT CGCGAAAACC GTCAGGGGCA TGAGGAGGCA GGGGAAGATC
AGCGACGAGA TAAACATAGC ATACCTAGAC GGCTCCGTGT ATGTGAACTG CGACGGCGGC
CGCATCAGGA GGCCTTTACT CGTCGTCGAG GGCGGGAGGC TCAAGCTGAC GAAGGAGATC
GTGGAAAAGG TGAGACGTGG CGACTTGACT TGGGACGACT TGGTCAAGAT GGGGGTTATC
GAGTACCTAG ACGCCGACGA GGAGGAGAAC GCCCACATCG CCGTTGACCC AGACGTCGAC
CTCAGCAACT ACACACATGT GGAGATCGTG CCGTCGTCTA TACTCGGCGC CGTGGGCTCC
ATTATCCCCT ACCTCGAGCA CAACCAGTCG CCGCGTAACC AGTACGAAGC AGCTATGGCG
AAGCAGTCGC TCGGCCTACC CCAGTCCAAC TTCTTGTACA AGCTGGACTC GCGGGGCCAC
ATGTTGTACT ACCCCGAGAG GCCTATAGTG ACCACGCGCG GTTTGGAGCT CGTGGGCTAC
TCCAGAAGGC CGGCGGGCCA AAACGCGGTT GTGGCGCTAC TCACCTACAC GGGCTACAAC
ATAGAGGACG CCGTGATCTT GAACAAGGCC TCTGTGGAGC GCGGCATGTT CCGCTCGGTC
TTCTACAGAA CGTACGAGAC CGAGGAGCAG AAGTACCCAG GCGGGGAGGA GGACAAGATA
GAGATCCCCG ACAGCTCCGT CAAGGGCTAC AGGGGCCCGG AGGCCTACAG CCACCTGGAC
GAGGATGGAA TAGCCCCGCC CGAGGTCTAC GTCAGTAGCA ACGAGGTCCT GGTGGGGAAG
ACCTCTCCGC CGAGGTTCTA CACAACGCTG GAGGCCGAGC GTATCTTGAA GGAGAGGAGG
GACGCCTCTG TGGCTGTGAG AAGGGGGGAG AAGGGCATCG TGGACAGGGT CATCATTACG
GAGTCTCCAG AGGGCAACAA GCTCGTCAAG GTGAGGTTGA GGGAGCTGAG GGTGCCGGAG
CTTGGGGATA AGTTCGCCTC CCGCCACGGG CAGAAGGGGG TCGTGGGCAT GTTGCTTAGG
CATGAGGACA TGCCGTTTAC CGAAGACGGC ATCGTGCCCG ACATAATAGT CAACCCACAC
GCGTTGCCGT CGCGTATGAC CGTGGCGCAA CTACTCGAGA GCATGGCCGG CAAAGTAGGC
GCCTCCCTCG GCGCTTTGGT AGACGCCACA GCCTTCGAGG GGGTGAAGGA GGAGGATCTG
AGGAAGCTGT TGCTTAAGCT CGGCTACAAG TGGGACGGCA AGGAGGTCAT GTACAGCGGC
ATCACCGGCG AGAGGCTGGT GGCCGACATA TTCATAGGCG TTGTCTACTA CCAGAAGCTA
CACCACATGG TTGCCGACAA GATCCACGCG AGGGCAAGGG GCCCCGTCCA GATCTTGACT
AGGCAGCCGA CCGAAGGCCG CTCCCGCGAG GGCGGTCTGA GGCTTGGCGA AATGGAGAGA
GACGTGTTGA TAGCCCACGG CGCCTCGGCC CTGCTGTATG AGAGGCTTGT GGAGTCCAGC
GACAAATACA CCATGTATGT CTGCGAGCTC TGTGGACTAC CGGCGTATCT AGACGCCAAG
TCAAACAAGC CTAAGTGCCC CATACACGGC GACACAGGCC AATTCGCCAA GGTGGTTGTG
CCCTATGCCT ACAAGCTACT TCTACAGGAG CTCATAGCAC TTGGGATATA TCCAAAGCTG
GAGCTCACCG AGGTGTTGGA GTAG
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| Protein sequence | MVDLLPLPVI VSQQDGKFPT RDDRWVLVER FIKDKGLANH QIKSFNDFLD KKLPKIVEDF
KVVETEIKGL KLVLERIEVG WPKIKESDGS ESIIYPMEAR LRNATYSAPL YLTATLYVDD
EPYVTETFYI GELPIMVKSK RCNLTRLRPG EYIKKFEDPQ DFGGYFIING SERVIISQED
LVADRPIYDR GDKPSVKYIA KTISTGIGYR STLTVELNRD GVIYVTLSAM PVKIPFPIYM
KALGLETDED VVKAVSDDPE IQKELLPSLI AANQIAITRE DALDFIGGKV AVGQPKPIRV
EKAYQLLDKY FLPHLGTTTP DEKRQQEIRL KKALMLGQIV KGLVELQLGR RKPDDKDHVA
NKRVRLVGDL MTQLFRTVLK QFLQELKSQL EKYYARGRIP HIQTIVRPDI ITERVRQALA
TGNWVGGKTG VSQILDRTNY MSTLSYLRRV VSSLSRTQPH FEARDLHPTQ WGRLCAVETP
EGQNVGLVKN LALLAEITTG VDEGEVEQLL YNLGVVPLLK AREEGIRGAE VYINGRLIGV
HPNPEELAKT VRGMRRQGKI SDEINIAYLD GSVYVNCDGG RIRRPLLVVE GGRLKLTKEI
VEKVRRGDLT WDDLVKMGVI EYLDADEEEN AHIAVDPDVD LSNYTHVEIV PSSILGAVGS
IIPYLEHNQS PRNQYEAAMA KQSLGLPQSN FLYKLDSRGH MLYYPERPIV TTRGLELVGY
SRRPAGQNAV VALLTYTGYN IEDAVILNKA SVERGMFRSV FYRTYETEEQ KYPGGEEDKI
EIPDSSVKGY RGPEAYSHLD EDGIAPPEVY VSSNEVLVGK TSPPRFYTTL EAERILKERR
DASVAVRRGE KGIVDRVIIT ESPEGNKLVK VRLRELRVPE LGDKFASRHG QKGVVGMLLR
HEDMPFTEDG IVPDIIVNPH ALPSRMTVAQ LLESMAGKVG ASLGALVDAT AFEGVKEEDL
RKLLLKLGYK WDGKEVMYSG ITGERLVADI FIGVVYYQKL HHMVADKIHA RARGPVQILT
RQPTEGRSRE GGLRLGEMER DVLIAHGASA LLYERLVESS DKYTMYVCEL CGLPAYLDAK
SNKPKCPIHG DTGQFAKVVV PYAYKLLLQE LIALGIYPKL ELTEVLE
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