Gene Tneu_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1913 
Symbol 
ID6164922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1685585 
End bp1686067 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID641669076 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001795274 
Protein GI171186355 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.57965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTGG CGGTCATCAT GGGCTCCATA AACGACCTAG AGGTTATGAA GGAGGCTCTG 
GAGGTGCTGG AGGCCCTGGG CATCCCCTAC GAGGCTAGGG TAGTCAGCGC CCACAGGACG
CCCGACTTCA TGGCCGAATT CGCCAGAGGC GCGGAGGAGA AGTTCGACGT GGTTATCGCC
GGGGCCGGCG GGGCGGCCCA CCTCCCCGGC ATGACGGCGG CCCACACGCC TCTTCCCGTA
ATCGGCGTGC CCATACCCAC GAGGCACCTC GGCGGCCTCG ACTCCCTACT ATCTATAGTT
CAGATGCCGA GGGGGACGCC GGTGGCCACC GTGGCCATAG GCGGCGCCGC CAACGCCGCC
TTCCTCGCGG CGAGGATACT GGGCGTCAAG TACCCCGAGG TCCGGGAGAA GGTGAAGAAG
CACATGGCCC AGATGCGGGA CGAAGTCCTC TCAAAGAGCT TCATAAGGGA GTTTAAGCAG
TAG
 
Protein sequence
MKVAVIMGSI NDLEVMKEAL EVLEALGIPY EARVVSAHRT PDFMAEFARG AEEKFDVVIA 
GAGGAAHLPG MTAAHTPLPV IGVPIPTRHL GGLDSLLSIV QMPRGTPVAT VAIGGAANAA
FLAARILGVK YPEVREKVKK HMAQMRDEVL SKSFIREFKQ