| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1819 |
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| Symbol | |
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| ID | 6164597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1597193 |
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| End bp | 1599301 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641668982 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001795182 |
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| Protein GI | 171186263 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000524613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGGA GGATAGAGCT GTACAACTTC AAGGCCCACG CGAAGGCCGT CTTCAAGCTG
GGGGAGGGGG TGAACTTCAT ATACGGCCCC AACGGGTCTG GAAAAACCTC CCTCATGGAG
GCCGTGGCCG TGGCCTTGTT CGGCTCCCAG TGGGTGAGGA GGACGGGGGG CAGGTGGGCC
GACTACCTCA GGAGGGGGGC GGCCGCCGGG GAGGTCAAGC TACACCTAAG CCACATGGGG
CGGGAGGTGG TGGTCGTTAG GCGGTTCGGC GAGGGGGGGA GCTCCCACTC GGGCACCTAT
CTCTCCATCG ACGGGTCGAC GGTCGCCAGG GGGGACGCGG ACGTCACGGC TGCTGTGGCC
ACTAAGCTGG GCATCGGCGT TGAGGAGTTT AGACACCTTC TATACATTAG GCAGGGGGAG
CTGAGGCTCA TATTGGAGGA GCCCGAGTAT ATAGATAGGG TTCTCCGCCT AGATGAGTTC
GACAAAGTGG ACGAGCTGGT GCGGGAGGCC TACAACGAAC TCAAGGCGAA GAGGGAGAGG
GTGGGGGGGA GGGCGGAGGA GCTCGAGAGA AGGGCCCCCC AGCTGAGGTC GCGGATAGAG
GCGCTCTCTA GGAGGCTTTC CGAGGCGGAG GAGGCGTTGG CTAGGCTTGA GGCCGACGAG
GCGAGGTTCG TGGAGGCGGA GAGGAGGTAC CTCGCCCTTA GGGAGCGCTA CATATCGCTT
AGCAAGGAGA GGGAGTCCCT TGAGAAGGCT CTGGAGGACG GGGCGCGCGC CGCCCTTGAG
CTGGAGAGGG ATCTGGAGCA GCTGGAGCGG GAGCTGGAGG AGGTGAGGAA GGCGGAGGAG
GAGCTTAAGT CACTCCCCGA GGTGGGCGAT GTGGAGGGGG AGTACCACCA GCTTCGGCAG
CTTCTGGCCA CCGCCGAGAG GGTCCCGCCT GAGGTGAGGA GCTACGACCC GAGGGCTCTG
GAGGAGGCGA GGAGGCGCTA CGAGGAGGCG GCTAGGAAGC ACGCGGAGGT GAGGTCCAGG
CTTGAGCTAC TGAGGGACGT GTTGAGGGTT GCCAAGATGT CGGAGGGCGG GAGGTGCCCC
GTCTGCGGGG CTCCTCTGAC GCGGGAGGCC GTTCAGAGGC ACGAGCTGGA GGCGCTGGGG
CTGGAGAAGG AGGAGGAGCG GCTCTCTAGG CAGATCGAGC AGCTTCAAGC CGAGATCAAG
AGGCTGGAGG CGCTGGACAG AACATACAGG ACATACGCCC AGTACCTCTC CGTGGATGTC
CAAGCGGCAA GGAGGAGGCT GGCGGAGCTG GAAGCGCTCT ACCAGAGGAA GAGGGAGGTG
GAGAGGAGGA GGGCCTACCT CTCAGCGCTT GTGTCCAGGA GGGGGGAGGC GGAGAGGCGG
CTGGCCGAGC TTAGGGCTAG GAAGGCCGAG GCCGAGAGGA AGATAGCGGA GGCCAACGGG
AGGCTGGCGG CTGTGGAGGC GGAGCTTAAG ACACTAGAGG CGGAGGTCAA GAAGGCTGAG
GAGGAGTACG CGGTGCTTAG GGCTAGACAC GAGGAGTACC TAAGGGCTAA GTCGCTGGCG
TTGGAGCTCA GGCGTCAGCT GGAGGAGGCC CGGGGGGAGC TGGCGGCTGT GGAGGCGGAG
CTGGCGAAGG CCCGCACCGA GGCGGAGAAG CTGGAGCGTG GGCTCGGCGC GGCTAGAAAC
ATCAGGTCCG TGTTGGGGGA GCTGAAGCCC CTCGCCAGGC AGATACTGAC GAAGGCCATA
AACGAGGAGC TCAACGCCGT GTTTCTAAAG CTGAGGCACA AGGAGTCCTT TAAATCCGCC
CACCTGGCAG AGGTAGACGG GAGGTACGTC CTCAAGGTGA GCACCCCCTC CGGCCCAATA
GACCACAGGC TCCTCTCGCT GGGTGAGCAG AACCTCCTCG CCCTCTCCCT ACGCGTGGCG
CTCGCCAGAG CTCTCCTCGG CGGTGCCCCC TTCATGATGT TTGACGAGCC GACTGAGCAC
CTCGACGAGG AACACAGGAG GAAGATCGTG GAGCTGGTGA GAGACCTCAC CTCCGTCGTG
CCGACTGTAG TCGTCACATC GCACCTGGGA GAGTTCGAGG AGGTGGCCGA CGTGGTGATA
CAGCTGTAG
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| Protein sequence | MIRRIELYNF KAHAKAVFKL GEGVNFIYGP NGSGKTSLME AVAVALFGSQ WVRRTGGRWA
DYLRRGAAAG EVKLHLSHMG REVVVVRRFG EGGSSHSGTY LSIDGSTVAR GDADVTAAVA
TKLGIGVEEF RHLLYIRQGE LRLILEEPEY IDRVLRLDEF DKVDELVREA YNELKAKRER
VGGRAEELER RAPQLRSRIE ALSRRLSEAE EALARLEADE ARFVEAERRY LALRERYISL
SKERESLEKA LEDGARAALE LERDLEQLER ELEEVRKAEE ELKSLPEVGD VEGEYHQLRQ
LLATAERVPP EVRSYDPRAL EEARRRYEEA ARKHAEVRSR LELLRDVLRV AKMSEGGRCP
VCGAPLTREA VQRHELEALG LEKEEERLSR QIEQLQAEIK RLEALDRTYR TYAQYLSVDV
QAARRRLAEL EALYQRKREV ERRRAYLSAL VSRRGEAERR LAELRARKAE AERKIAEANG
RLAAVEAELK TLEAEVKKAE EEYAVLRARH EEYLRAKSLA LELRRQLEEA RGELAAVEAE
LAKARTEAEK LERGLGAARN IRSVLGELKP LARQILTKAI NEELNAVFLK LRHKESFKSA
HLAEVDGRYV LKVSTPSGPI DHRLLSLGEQ NLLALSLRVA LARALLGGAP FMMFDEPTEH
LDEEHRRKIV ELVRDLTSVV PTVVVTSHLG EFEEVADVVI QL
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