Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1714 |
Symbol | |
ID | 6165883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1508705 |
End bp | 1509334 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641668879 |
Product | hypothetical protein |
Protein accession | YP_001795080 |
Protein GI | 171186161 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0851661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000920939 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGGAAAG CCCTGTTCAT AGCCACCACA TCCCTCACGA GGTCAGGCGT CGAGGCCTGC GCAGACTTCC TAGAGGCAAC CGCACCTAGA CTCGGCGAGT TCTGGCTACC GCTCCCCAGG GAGCTCTGCG CCGGCCGGCC AGTAGACCTA GGCCCCCTGG AGAGGTACCT AGAGCCACTC CTAGCCCTCT ACCACGAGGT AGAGGCAGAC TGGCGTTGCT ACGGCTCCGC AGAGGACCTC CGGCGGAGGG AGATGGCCAC GGCCAAGCTA GCCGCCCTGG TCATAAAGGC GAGGGTATAT GGGAAAATCG ACCTAAGGGA GTGGGACACC TACTTCAGCC GCCCGCCGAG CCCCCCGCCC ACCCCCTCCC TTGTCTTCGG CACCGTGGGA GGAGAGGAGC TCGTGATATG CGGAGCCCAC CCACCCAACC CAATAGAAGC CGCACACGAG CTGTGGCACA CCCTCACCCC ACAGAAGAAG ACAGAACTAG CCACGTGGAT CACCAAATTC ATAGCACATA TAGTAGACAG CATAAACCTC GACGAGGCAT ACCACAAACT CATAAGAGAA GGCTGGGAAA ACACATACAA GACAATACTA GGCAACTCGA GGCCACAGCC AAAGTGGTGA
|
Protein sequence | MRKALFIATT SLTRSGVEAC ADFLEATAPR LGEFWLPLPR ELCAGRPVDL GPLERYLEPL LALYHEVEAD WRCYGSAEDL RRREMATAKL AALVIKARVY GKIDLREWDT YFSRPPSPPP TPSLVFGTVG GEELVICGAH PPNPIEAAHE LWHTLTPQKK TELATWITKF IAHIVDSINL DEAYHKLIRE GWENTYKTIL GNSRPQPKW
|
| |