| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1689 |
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| Symbol | |
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| ID | 6165113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1481956 |
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| End bp | 1484301 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641668854 |
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| Product | dolichyl-diphosphooligosaccharide--protein glycotransferase |
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| Protein accession | YP_001795057 |
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| Protein GI | 171186138 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.317922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.350479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGAA GGGAGAAGTT GCTGGTAGTT GTTCCCGGCC TCCTGGCGGC GTTTGCCATC
GCCCTCTACG CCAGGATGTA TAGGGTGTTT CTCTGGGGGT GGTGGCTGGA CGAGTTCGAC
CCCTACGTGA GGTACTACCT GGCCAAGTAC ATGCTTGAAC ACGGCGTTGG GTGGTGGTGG
AGCGGCGCGC AGTTTACCCA GTTCTGGCAC CCCTACGGCA TAGACTGGGG CAGGGTGCTC
CTCCCGGGCA CCTCCCTCTA CGGCCTCTTC ATCTACGCCC TCCTGCGCCC CTTCGGGGTG
GATCTGTGGC ACGCCGTCAT AGCGGCCCCG GCGGTGGTGA ACTCCCTAGC CGTCTTCTCC
ATGTTCTACC TGGGGTACAG GGTGGGGGGC GAGCTGGGTA TACCAAACGG CGGGGTTAGA
GTTGGCCTAG CCGCCGCGTT GCTCACCGCC ATAGCGCCGG CCTTCGTCGA ACGCGGCTTC
GCCGCCTGGT TCGACGACGA GCCGATAAGC CTCTTCCTAA TCCCCCTGGG CCTTGCCCTG
TTGATAGACG GCCTTAGGAG GCCGTGGGCC GGGGCTTTGG CAGGAGCCGC GTTGGGCTAC
GTGGTGTGGA CGTGGGGTGG GCACTTCTAC GTCTGGAACC TAGTGGGCCT ATACGCCATG
GTCCTCCCCG CCTACTACTA CCTAAAGCTA GCCCTGGCGA AGCCGGGGAA GAAGAGCAGG
CCCCCGGAGC TGCCCTTCGA CGCGAGGAAC TTCTTCCTGT CCTACCTCCT CTTCTACGCG
GTGTACGCGG CCTTTGTGGC GTCTATACCT AGATACGGCG TGCACACGGT GGCGAGCGCC
TTCAACATAC TGCCGACTTT CGGCCTCGCC TCGGCGGCGT TGACGTGGGC GCTTGGCTTA
AAGCTCGGCG CCGCCAGAAC AGCCGAGCTA CTTAGGCGCT ACATATGGGC CGTGGCGGGC
GTCGTAGCCG TCGGCTTGGC GGCGTTCGCG GCGGCTATCG CCGCTGGGCT CATCGGAGGG
AAGTTCCTCG CCACCCTCCT GCCCTTCGGC AGATCGGCCA TCGTGGCCAG CGTCGCGGAG
CACTCGACGA CTCAGTTTAT ACAGATCTTG AGTAGGTACG GCCCCCTAAT CCCGTTCATA
GTGGCCTCTC TGCCGTATCT CTTCACGCCC AGCGGCTTGC TGGCGCTGAC TTACCTAGTT
ACCGCGGGCT ACGCCGCCGC CACCATGGTG CGCCTCCTCG TGCTCCTGGC CCCCGGCGCG
TTGATCGCGG CCGCCGTGGG CATGGTTAAG CTCTTTGACA ACAGGAGGTT TGGCCATATC
GTAATGGCGG CGGCCGTGGT CTCCACAGTG ATGTTGCTCT CCGCCGTGAT GCCGGCCGTC
TCGCAGGGCC AGGGCTTTGT CCTAGGCCTC GCTAGGCAGC CTACACAGAT AGCCACCTCG
GCCGTTGGGG CGGTGAGCGA CGACTTCATA GACGCGTTGA TGTGGCTTAA GACCCGTCTG
CCGCCTTACG AGCCCGTGGC GTCGTGGTGG GACTACGGCT ACTGGATTTC TGTCGTCGGG
AACAAGACGA GCCTCGCCGA CAACTCGACG ATAAACGCGA CGCAGATCGG CGAAATAGGC
CTTGCGTTTA TGGCGCCGCC TCAGGTAGGC GCCGCCATAT TTACAAAGCA GTTCGGCACC
AAGTACGTCC TCGCCATCAT GCCCTACGCC ATATACCCCG CCACCTTGCC CACGGGCCTG
CAGACGCCTC TGCTTGTGCA CGAGTATCCG CCTGGCGGCG ACTTCCTAAA GTCCTACTGG
ATGACGAGGA TAGCTCTGGA GAACGTGCGC GACGCCGCGG ATGTGTTAAA GGCGCGCGGC
ATGAGCCCCG AGGACTATAT ATACACGAGG GCGATGTCTT ACCCGGGTCC TCCACCTAAC
GCGGCGTATG CCTACTTCAC CATCGGGGGT AGCTACTACC CAGTGCCGCT GGATTTAAAC
AGGACGTTGT ACGCTATGCT CTTCTCCAAG GAGAGGTTCT TCCCCATATA TGGCAACTAC
AGCCAGTTCC TCCCCTGGAT CTTCGAGGGC GTGGAGCAGC CAGGCGGGGG CTTCACGTCG
TTTAGATCTC TGAGGCTCGT CGGGGGCAAC GTCTATCTGC CGACCGACAT AACGCCGCAG
CTCCAGAGCT TGGGGGCCTA CGTGATTAAG GGCTGGGACC GCGGCGGGGT AGACGTAGTC
GTTGACCCGT TGACGAACGC CACCCAGAGG ATCCCCCTGG TTACGGCCGA CCCGCGGCCT
CTGAGGCTTG TGTACGTCTC CAAGCCCTAC GGCTGGGTGG TGGTGTACGA GGTGGAGGGG
AGCTAG
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| Protein sequence | MDRREKLLVV VPGLLAAFAI ALYARMYRVF LWGWWLDEFD PYVRYYLAKY MLEHGVGWWW
SGAQFTQFWH PYGIDWGRVL LPGTSLYGLF IYALLRPFGV DLWHAVIAAP AVVNSLAVFS
MFYLGYRVGG ELGIPNGGVR VGLAAALLTA IAPAFVERGF AAWFDDEPIS LFLIPLGLAL
LIDGLRRPWA GALAGAALGY VVWTWGGHFY VWNLVGLYAM VLPAYYYLKL ALAKPGKKSR
PPELPFDARN FFLSYLLFYA VYAAFVASIP RYGVHTVASA FNILPTFGLA SAALTWALGL
KLGAARTAEL LRRYIWAVAG VVAVGLAAFA AAIAAGLIGG KFLATLLPFG RSAIVASVAE
HSTTQFIQIL SRYGPLIPFI VASLPYLFTP SGLLALTYLV TAGYAAATMV RLLVLLAPGA
LIAAAVGMVK LFDNRRFGHI VMAAAVVSTV MLLSAVMPAV SQGQGFVLGL ARQPTQIATS
AVGAVSDDFI DALMWLKTRL PPYEPVASWW DYGYWISVVG NKTSLADNST INATQIGEIG
LAFMAPPQVG AAIFTKQFGT KYVLAIMPYA IYPATLPTGL QTPLLVHEYP PGGDFLKSYW
MTRIALENVR DAADVLKARG MSPEDYIYTR AMSYPGPPPN AAYAYFTIGG SYYPVPLDLN
RTLYAMLFSK ERFFPIYGNY SQFLPWIFEG VEQPGGGFTS FRSLRLVGGN VYLPTDITPQ
LQSLGAYVIK GWDRGGVDVV VDPLTNATQR IPLVTADPRP LRLVYVSKPY GWVVVYEVEG
S
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