| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1390 |
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| Symbol | |
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| ID | 6165075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1234437 |
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| End bp | 1235162 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641668545 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_001794761 |
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| Protein GI | 171185842 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.804197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTCCGC CGGCAATGGC AGGTTACGAT AGAGCTATAA CGATATTCTC GCCTGAGGGG
AAGATCTACC AGGTGGAATA CGCGGGAGAG GCCGTAAAAA GAGGCTGGCC TACCGTCGGC
GTGAAGTGTA GAAGCGGCGT GGTGCTCGTG GCGGAGAAGA GGAAGATTTC GGCGCTCTTC
GACCCATCCT CCCTTGAGAA GATATACCTT GTCGACGAAC ACGTGGCCGC GTCTCCCTCC
GGCCTTCTCG CCGACGCGAG GATCCTAATA GACTACGCGC GAGATGTGGC GCTCAGTCAC
AGATTTATCT ACGACGAACC GATCGACATA GAGCTTCTAA CAAAGGCTGT CTGCAATCTA
AAACAGCAGT ATACGCAGTT CGGCGGCACC AGACCCTTCG GCGTAGCTCT GTTGGTGGCT
GGGGTGGATA GACACGGCGC TCGCCTATTT CAGACGGACC CCTCAGGGGT ATATATAGGC
TACTTCGCCA CGGCAATAGG CGCAGACTCG GGAACGATAT CGGAATTCCT AGAGAAGAAC
TACAAATTCG ACTTGGGAAT GGGCGAGTGC GTGGAGCTGG CTGTAAAGGC CTTAGCCTCC
GCGGTGGAGA TCACAGAAAG CGGCAACATC GAGGTGGCCT ACGCCACAGT AGAGGAGAAA
AAGATGAAGA AGATGACGCA GGAAGAGGTC GCCGCCCTGG TGGCGAAACT ACCCAAGAAG
TCCTAA
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| Protein sequence | MFPPAMAGYD RAITIFSPEG KIYQVEYAGE AVKRGWPTVG VKCRSGVVLV AEKRKISALF
DPSSLEKIYL VDEHVAASPS GLLADARILI DYARDVALSH RFIYDEPIDI ELLTKAVCNL
KQQYTQFGGT RPFGVALLVA GVDRHGARLF QTDPSGVYIG YFATAIGADS GTISEFLEKN
YKFDLGMGEC VELAVKALAS AVEITESGNI EVAYATVEEK KMKKMTQEEV AALVAKLPKK
S
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