| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1334 |
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| Symbol | |
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| ID | 6165145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1195450 |
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| End bp | 1196055 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641668489 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
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| Protein accession | YP_001794706 |
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| Protein GI | 171185787 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.144455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.461207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACAT ACAGTTTGAA AACGCCCCTC TCTAGCGAAG ATGTGGCTAA GCTCCGGGTC
GGCGATACGC TCTACATAAG CGGGGTTGTG GTCAGCGCTA GGGATTCCGC GCATAAGAGG
ATGTTGGAGC ATATAGGGCG TGGAGAGGCG TTGCCGGTGG ACCTAAGAGG CGGCGTTATA
TACCACGCGG GGCCTGTCGT GAGAAAGACC GAGAGGGGGT GGGAGGTGAT AAGCATGGGG
CCCACCACCT CGGCGAGGAT GGAGGCCTTT GAGGCAGATG TGATCGAGAG GCTGGGGGTG
AAGCTGGTGG TGGGCAAGGG GGGGATGGGG AGGAGGACCG CGGAGGCCAT GAAGAAATAT
ACGGCCGCCT ACGCTATATT CACAGGAGGG GCTGGAGTCC TTGCGGCGAA GGCGATAAAG
AGGGTTGTTG ACGTGTATTG GCTAGACCTG GGCGTAGCCG AGGCCATGTG GGTTCTTGAG
GTGGAGAACT TCGGGCCGCT GACGGTGATG ATAGACCCCA CTGGCAGAAA CTACTACGAC
GAGCTGAGGG AGGAGGCGAA GAGGAGGATA CCTGAGATCT TGAAGTCCCT GGAGTGGCCT
CATTAA
|
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| Protein sequence | MATYSLKTPL SSEDVAKLRV GDTLYISGVV VSARDSAHKR MLEHIGRGEA LPVDLRGGVI
YHAGPVVRKT ERGWEVISMG PTTSARMEAF EADVIERLGV KLVVGKGGMG RRTAEAMKKY
TAAYAIFTGG AGVLAAKAIK RVVDVYWLDL GVAEAMWVLE VENFGPLTVM IDPTGRNYYD
ELREEAKRRI PEILKSLEWP H
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