Gene Tneu_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1170 
Symbol 
ID6165271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1061093 
End bp1061761 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID641668320 
Producthypothetical protein 
Protein accessionYP_001794545 
Protein GI171185626 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0259926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGACT TCGTGGGAGT TGACTTGAAG AGGGAGTTCC TAAGGCTTCT TCGGGAGGAT 
GAGGAGTTTA GGCTGGCTGT AGCCGGCCTC ATAGGGCTGG GGGAGGTGCT ACAGGAGCTG
AGGAGGCTGA GGGAGGACTT CCAAACCTAC ATAAAAGAAC AGGAGAGGAG GTGGAGAGAA
AACGAACGGA GATGGAGGAT GTACGAGAGG CGGTGGAGGG CCAACGAGCG GAGGTGGCGT
GAGGCTTTTA AGAGGTTTGA GGCGCTTGAG CGGGGTCTCC AGAGGGTGGA TAGGCGGCTT
GTCCTTCTGG GCGCCCGCTG GGGGGTGGAG GCGGAGGAGG CTTTTAGGGA GGCGGTGCGG
GGGATCGTGG AGGATGTATT GGGGGTTGGG GAGGTTGTGC GGTGGTCCTA CTTCGACGGG
GAGGGGCTGG TGTTCGGCTT CCCCTCGCCC GTGGAGGTGG ACGTGTTGGT TAAAGACGGC
GTGCATATAC TCGTGGAGGT TAAGGCCTCC GCTACGGACA GCGACGTGGC TAAGCTGTGG
CGGATAGGCC AGCTCTACCG CCGCGCCACC GGCGTAGAGC CGAAGCTGGC CTTGGTCACC
CCCCACATAG ACGAGCGTGG TAGAAAAGCC GCCGAGGCGC TGGGCATCCA GGTTTATACC
TATTTATAG
 
Protein sequence
MVDFVGVDLK REFLRLLRED EEFRLAVAGL IGLGEVLQEL RRLREDFQTY IKEQERRWRE 
NERRWRMYER RWRANERRWR EAFKRFEALE RGLQRVDRRL VLLGARWGVE AEEAFREAVR
GIVEDVLGVG EVVRWSYFDG EGLVFGFPSP VEVDVLVKDG VHILVEVKAS ATDSDVAKLW
RIGQLYRRAT GVEPKLALVT PHIDERGRKA AEALGIQVYT YL