| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1144 |
|---|
| Symbol | |
|---|
| ID | 6165764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1033513 |
|---|
| End bp | 1034073 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641668295 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001794520 |
|---|
| Protein GI | 171185601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000125974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000345687 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTACC TCCTGGAGGC TGTGGGGGCT AGGGGCGCCG GGAGGTTGCT GTCTCGCGTC
GGCGGGGACT GCCCAGACCC GAGGTCCGTC CCCGAGCTAC ACACGGCGCT GGCGCTGGGG
GGCGGGGTGG AGCTGGAGCT GGCGGCGGCG GACACGCCGG AGTCGGCCGC GGCGGCGAGG
TGGCTTCTGG AGTGCGCCGG GAGGCTCGGC GTGGCGAAGC CGGTGGGGTT CTTCGTGGTG
AGGGGGCTGG CGCCTGGGTC CCTTACGGGG GCCGCCGAGC TCTTCGACCA GGCCGTGGTG
AGGCTTCTGA GGAGGAGGGG AGAGGCCTAC GTGGGGGTGA CGTCGGGCTG GAGGGTCCTC
TCTATCTACC TGGCGCTGGC GGCGTGGGTG TCGGGGGCGG TGCCCGTCTA CGTGGACAGG
TCGGGGGGTC TCCACGCGCT GCCGAGGGTC TCGCTGGGGG TTGAGGATCT GCCGAGGGAG
CTCCTCTACA GGGAGGACGG GAGGCCCAGG AGGTGGCTGG AGGAGCTCAG CCGAAGTGGA
CGGCGGTTTT CCTCACCTTG A
|
|---|
| Protein sequence | MRYLLEAVGA RGAGRLLSRV GGDCPDPRSV PELHTALALG GGVELELAAA DTPESAAAAR
WLLECAGRLG VAKPVGFFVV RGLAPGSLTG AAELFDQAVV RLLRRRGEAY VGVTSGWRVL
SIYLALAAWV SGAVPVYVDR SGGLHALPRV SLGVEDLPRE LLYREDGRPR RWLEELSRSG
RRFSSP
|
|---|
| |