Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1142 |
Symbol | |
ID | 6165811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1029847 |
End bp | 1030419 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641668293 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001794518 |
Protein GI | 171185599 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.142818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000342837 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCCCT GCATTAACCC AAGCCTAATA CGGCAGTACC TCTACTGCCC CATGGCCGCC TACTACACCG CCACAGGCGC CCCGGAGCCC CCCACCCTCA GGATGCAGAA GGGCAGAGAG CTCCAGCAGG AGGCCGCACA AGCCGCCGCC AAGGCCCTAG GCGCCCAGAA GGCCGAATAC GCCGTCCACA TAGCCGCCCC GCCCCTCTGC GGCACGGTAG ACGCCGTCCT CTGGATCAAC GGAAGGCCAA GCCCCCTCGA GGTGAAGGCC GCGGCGAGGC CCCGCCGCAT CCCCATACAC CACAAGGCAC AAGCCGCCGC CTACACCGCC ATGGTGCAGA AACGATACGG AAAAGCCGTC ACCACAGCCT ACATATACTA CGCCGAGAGC GGCCACATAG CCCACATCCA CATCACCAAA GACCTACAAG AGCTGTTGAA CTACGCCGTC TCGAGACTAC AGCAGATACT CCAGGGAAAG CCGCCGGTCC TAAACCCAAA TCCGGCGAAA TGCCAAAACT GCTGGTACAG AAAATGGTGC AGCCACCTGC CAACAACAGT GGAAAAAATC TAG
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Protein sequence | MQPCINPSLI RQYLYCPMAA YYTATGAPEP PTLRMQKGRE LQQEAAQAAA KALGAQKAEY AVHIAAPPLC GTVDAVLWIN GRPSPLEVKA AARPRRIPIH HKAQAAAYTA MVQKRYGKAV TTAYIYYAES GHIAHIHITK DLQELLNYAV SRLQQILQGK PPVLNPNPAK CQNCWYRKWC SHLPTTVEKI
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