Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1093 |
Symbol | |
ID | 6165585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 977897 |
End bp | 979183 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641668245 |
Product | periplasmic binding protein |
Protein accession | YP_001794470 |
Protein GI | 171185551 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000816511 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00387756 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGTCCA GGCTCGCCTA CCTGCTCGCC GCGGTGGCGC TGGCCGTCGC CGCGGCGGCT TTTGTACAGA CGTACTACGC GGTGCAGGCG GTGAACGACA AGCTGGCGCA GCTCCAGTCT AGGGTGGAGG CGGTTGGGGC GGAGGTGTCG AGGGGCCTCG CGGGGGTGGA GGCCAAGCTG TCGTCTATAA ACTCGACGGC GGCAGCCGCC TACAGGGAGG CCAAGCTGCT GAGGGAGATA TCGGGGAGGC CCTCCGGCTT CGTGCCGGTG AGGTACGCCA GGCTCTTCTC CATACAGTAC GAGGGCGACG TCTATATCCT GAGGGACGCC CTTGGGCGGA GGATACTCCT CCTGCCGCGG GGCATGTCGC AGGACCTCGC CAACTACTAC AGGGCGAAGT ACAGGCCGGA CGCTGTTGTG TACTACCCCG TCAAGAGGGC GGTCTACATG TCCTCCACCG AGGTGGCCAT GGCCTACAGG CTGTATAAAG AGGCGGGCAG GGCGGACGTC CTTAGGTCGA TCGTGGGGAT AATGTGGGGG AGGGAGTACC GGTGGTACCT CCCGGAGGTG GAGGCGATGC TTAACAACGG CACCATAGCC GACGTGGGGC CGGCCTACTC GCCGGACTTC GAGAAGATCG CCTCGCTGAA GCCCGACGTG GTGTTTGTCT TCTACTACCC CGGCCCATAC GGCACCGAGT CCGTGGTGAA GAAGCTGGAC CAGCTGGGGA TCCCCTACGC CGTGGTTAAC GAGTTCCAGG AGCAGACGGC CCTTGGGAGA GCCGAGTGGA TTAAGTTCAT AGCCGCCTTC TACAACGCCA CGGACGACGC CGTCAAGATC TTCGACAGGG TGGAGGCGAG GTGGAGCTCC CTGGCATCCC TCGTGGCCGA CCTAGACAGG CCCAGGGTGG CGTGGTTCAC CATATTCGGC GGCGTTTTGT ACCCCGCGGG GGCTGGCGTG AGGGACCTCA TCAGGACAGC CGGCGGGAGG TACGCCTACG CCAACTACAG CAGGGTGGAC CTCGAGGTGG TGCTGAAGCA CAAAAACGAC GTAGACGTCT TGATCTGGTC AAGCTACGGC GTATCCAGCG TGAGGGATCT GCTCAAGGTG GAGCCGAGGC TGGCGGAGCT GAGGCCGGTG GTGCTTGGGA GGGTCTACGC CTACAGCCCC GCCTTCTACC AGCTTGCCAA CGCCTACCCC GAGCGGCTGC TGGAGGAGCT GGTGTGGATC ATACACCCCG AGGTGGCGCC GCCCGGCAAC TTCACCCTCT TTGTGCATCT GCAGTGA
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Protein sequence | MQSRLAYLLA AVALAVAAAA FVQTYYAVQA VNDKLAQLQS RVEAVGAEVS RGLAGVEAKL SSINSTAAAA YREAKLLREI SGRPSGFVPV RYARLFSIQY EGDVYILRDA LGRRILLLPR GMSQDLANYY RAKYRPDAVV YYPVKRAVYM SSTEVAMAYR LYKEAGRADV LRSIVGIMWG REYRWYLPEV EAMLNNGTIA DVGPAYSPDF EKIASLKPDV VFVFYYPGPY GTESVVKKLD QLGIPYAVVN EFQEQTALGR AEWIKFIAAF YNATDDAVKI FDRVEARWSS LASLVADLDR PRVAWFTIFG GVLYPAGAGV RDLIRTAGGR YAYANYSRVD LEVVLKHKND VDVLIWSSYG VSSVRDLLKV EPRLAELRPV VLGRVYAYSP AFYQLANAYP ERLLEELVWI IHPEVAPPGN FTLFVHLQ
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