| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1089 |
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| Symbol | |
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| ID | 6165555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 972979 |
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| End bp | 973995 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641668241 |
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| Product | ABC transporter periplasmic-binding protein |
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| Protein accession | YP_001794466 |
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| Protein GI | 171185547 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.167186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0159055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTA GGGGTTTATT GGCGGCTGTG GTGGTCGTCG CCGCCGTGTT GGCGGCCCTC
ATGGCGTGGC AGTCCCTCCA GCAGCAGATG GAGAGGAAGC TCGTGATCGT GGGGCCGGCC
GGCATCGGCG ACTTGGGCAG GGAGCTGGCC AGGAGGTTCA GCGAGAGGTA TGGGGTAAAC
GCCACCTTTG TGGCGCTTGG GGGGGCGGTG GAGATGGTGA ACGAGCTGGT GAGAAACAGG
GACAACCCGC CGTGGGACGT GGCCATCGGG GTGCCCGAGT TCTACTACAC CGTTCTGGTG
GAGAAGGGCG TGCTCTACTG CCCCGGCTTC AAGGTGGAGG GGGTGCCGGC CGAGGAGTAC
TGGGATCCCC ACGGCTGCGT CTACCCGCTT GACAAGTCCT ACATCGGGAT CGTCTACAAC
GAGTCGGCCC TCGCCGCGCG GGGCCTCAAG CCGCCTCAGA CCCTCGACGA TCTTCTGAAG
CCGGAGTACA GGGGGCTTAT CACATATCCC AACCCGGTCC AGTCGGGCAC CGGCCTCGCC
GTGCTCTCCT GGGTCATGTC TGTGAAGGGG GAGGAGGAGG GCTGGCGCTA CCTCAAGCAG
CTGTCCAGCC AGATCTCCAA GATCGGCTAC CCGTCCGGCT TCACGCCGTT GAGAAGCGCG
TTGAAGAGGG GGGATGTTTT GATCGCCCTC TCGTGGTACA GCCACGCCAT CGACCCCGGG
ACCCCCAGCA TGAAGGCCGC GACGTACAGC GCCTTCCTAT ACAAGGAGGG GGTGGCCGTG
TTGAAAAACG CCAGGAACAG GGACCTGGCC CTGGAGTTCG TCAAATTCGC GCTGAGTAAG
GAGGGGCAGG ACCTGGTCGA CCCCTACAAC TACATGCTCC CGGTTAGGCC AGACGCCGTG
GTTAAAAACA ACCTGGGCCT CCCGAGGCCG CAGTCCGTCG TCGTCTACAA CCCGGCGCTG
GGGTCCAAAG CCGACGAGTG GAGGCTGAGG TGGCAGAGGG AGATCGCGTC TGGGTGA
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| Protein sequence | MSIRGLLAAV VVVAAVLAAL MAWQSLQQQM ERKLVIVGPA GIGDLGRELA RRFSERYGVN
ATFVALGGAV EMVNELVRNR DNPPWDVAIG VPEFYYTVLV EKGVLYCPGF KVEGVPAEEY
WDPHGCVYPL DKSYIGIVYN ESALAARGLK PPQTLDDLLK PEYRGLITYP NPVQSGTGLA
VLSWVMSVKG EEEGWRYLKQ LSSQISKIGY PSGFTPLRSA LKRGDVLIAL SWYSHAIDPG
TPSMKAATYS AFLYKEGVAV LKNARNRDLA LEFVKFALSK EGQDLVDPYN YMLPVRPDAV
VKNNLGLPRP QSVVVYNPAL GSKADEWRLR WQREIASG
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