Gene Tneu_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1074 
Symbol 
ID6166159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp959465 
End bp960103 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID641668226 
ProductTenA family transcription regulator 
Protein accessionYP_001794451 
Protein GI171185532 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0564389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG AGAAGCTACG GGCCTGGGCA GACCCCATCT GGCAGGAGAT CCTCCGCCAC 
CCCTTCGTCG TGGAGGTCTA CCGCGGCTCC CTCCCCATGG ACAAGTTCAG GTACTACCTA
CTACAGGACT ACAACTACCT CGTCAACTTC GCCAAGGCCC TCTCCCTAGC CGCCGCCAGA
GCCCCCGGCG TGGAGCAGAT GAAGACGGCG CTGGAGCTGG CCCACGGGAC CGTCACGGGG
GAGATGGCCA ACTACGAGGC CCTCCTGAGG GAGGCCGGCC TCACGCTGAA AGACGCCGAG
GGGGCCGAGC CCAACTTCGT AAACGTGAGC TACATGTCCT ACCTCCTCTC CGTCTGCTCC
CTGGAGGGCT TTTATCAGTG CATGGCGGCC CTCCTACCCT GCTTCTGGAG CTACGCCGAG
ATAGCCCAGA GGCACAGAGA CGCGCTGGAG AGGAACCCCG TCCCCCTGTA TAGGAGGTGG
GCCTCGGTCT ACCTAACGCC GGAGTACAAC GCCCTCGTGG AGAAGCTACG CGCCCTGCTG
GAAAGCTCCG GCGCGCCGCC GGAGGCCCTC TGGCCCTACT TCAGACAGGC GTCGATATAC
GAGCTCAAGT TCTGGCAGGC CGCCTATGAG GGTCATTGA
 
Protein sequence
MATEKLRAWA DPIWQEILRH PFVVEVYRGS LPMDKFRYYL LQDYNYLVNF AKALSLAAAR 
APGVEQMKTA LELAHGTVTG EMANYEALLR EAGLTLKDAE GAEPNFVNVS YMSYLLSVCS
LEGFYQCMAA LLPCFWSYAE IAQRHRDALE RNPVPLYRRW ASVYLTPEYN ALVEKLRALL
ESSGAPPEAL WPYFRQASIY ELKFWQAAYE GH