| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0808 |
|---|
| Symbol | |
|---|
| ID | 6164298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 725536 |
|---|
| End bp | 726423 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641667966 |
|---|
| Product | 3-dehydroquinate dehydratase, type I |
|---|
| Protein accession | YP_001794193 |
|---|
| Protein GI | 171185274 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0710] 3-dehydroquinate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I
[TIGR01808] monofunctional chorismate mutase, high GC gram positive type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.716383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATATGCG GCGCGGTACC GGTTAGAAAG CCGGCGGACG TATATAGAGC TCTGGACTCC
CCCGCCCCCT GCCTCGAGCT AAGGCTCGAC TATCTGGAGA GCTCCCTCGC CGAGGCGAAG
CCCGCGTTGG AGGAGGCGGT CGCGAGGAGG ACAGTCATAT TAACAGTTAG GAGGAGGGAG
GAGGGGGGCG CCTGGCGGGG CACCGAGGAG GAGAGGGCGG CCCTCTACCT AAAGCTCCTG
GAGCTGACGC CCCACTTCGT AGACGTGGAG GCCGCCGCGC CGGCGGCTGG GCAGGTGGCG
GCCGCCAGGG GGAGGACTAA GCTTATAGCC AGCAGACACG ACTTCGGCGG GACCCCCCCG
TATGAAACCC TCCTCTCCTG GGCCCGGGAG GCGGCGGCCT TGGGCGACGT GGTGAAGATA
GTCACCTACG CCAGAGAGCC CCGGGACGGC CTCGCCGTTC TCTCCCTAAT CGGCGCCGTG
GAGAAGCCGA CGGTGGCCTT CGCCATGGGG CCGGCCGGGG CCTACACCAG GCTGGCGGCG
GCGGCCCTGG GGAGCCCCAT CATGTACGTA TCGCTGGGCG AGGCGACGGC GCCTGGCCAG
ATATCCCTAG ACGCCTACTA CGCCGCGCTC CTGGGCATGG GGGCCGCCCC CGGGGGTGAG
GGTCTGCCGG CGCTGAGGGA GGCGCTGGAC TGGATAGACG GCGCCCTCAT GCACCTTCTC
AAGAGGAGGC TGGAGGTGTG CCGCGACATG GGGAAGATAA AGAAGTCCGC CGGTCTCCCC
ATCTACGACG ACATCAGAGA GGCCCAGGTC TTGAAGAGGG CGGGCGACTT TAAACAGATC
TTCGAGCTGG TGGTGCAGAT GTGCAAGGCG GTACAACTAG TCGCCTAG
|
|---|
| Protein sequence | MICGAVPVRK PADVYRALDS PAPCLELRLD YLESSLAEAK PALEEAVARR TVILTVRRRE
EGGAWRGTEE ERAALYLKLL ELTPHFVDVE AAAPAAGQVA AARGRTKLIA SRHDFGGTPP
YETLLSWARE AAALGDVVKI VTYAREPRDG LAVLSLIGAV EKPTVAFAMG PAGAYTRLAA
AALGSPIMYV SLGEATAPGQ ISLDAYYAAL LGMGAAPGGE GLPALREALD WIDGALMHLL
KRRLEVCRDM GKIKKSAGLP IYDDIREAQV LKRAGDFKQI FELVVQMCKA VQLVA
|
|---|
| |