Gene Tneu_0677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0677 
SymbolileS 
ID6165322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp606899 
End bp609832 
Gene Length2934 bp 
Protein Length977 aa 
Translation table11 
GC content56% 
IMG OID641667830 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001794062 
Protein GI171185143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTG GGGATTTTAA GCTACAGCCT ACCTACGTCC CATACGAGGT TGAGAGACGT 
GTCCTAGAGT ACTGGCGGAC AAACGGGATA TTCCAGAAGT GGAAGAGCTG GCGCGGAGGC
CCCATCTTCG CCTTCCTTGA GGGCCCGCCT ACCACCAACG GGATGCCGCA CGTAGGCCAC
GTCAGAGGAC GGACTTACAA AGATGTGGTG CTTAGGTTCC ACAGGCTTCT GGGCTACGAC
GTCTGGCCGC AGGGTGGTTG GGACATGCAG GGCATGCCGG TTGAGTGGGA GGTGGAGAAG
AGGCTTAAGC TAAGGAGCAA GAAGGAGGTT GAGCGATATG GGCTTGAGCA GTTCGCCAAA
AAGTGCAACG AGCTTGTGGA GGAGTATCTC ACATACTGGA GGGAGTGGGG GACCGAGAGG
CTGGGGCTCT GGCTTGACGT AGAAAACGCG TACGAAACCA GGCAGCCTAC ATACATTGAA
TACGCTTGGC GCGTGATCAA GAAGGCGTAT GAACGCGGTT TGTTGGTAGA GGACTACAGA
GTGTTGTGGT TCTGCCCCCG GTGTGAGACC TCGCTCAGCG ACCACGAGGT GGCCCTTGGC
TACGAGGAGA GGAGAGACCC CTCGATATAC GTCAAGTTTA GGGTTGAGGG CCGCGGGGAC
GAGTACCTCG TCATCTGGAC CACGACCCCC TGGACCCTAG TCGACAACGA GGCCGTGGCG
GTTCACCCGG AGTACGCCTA CGCCAAGGTC GAGGTTGAGA ACGGGGAGAA GTGGTGGGTC
GCGGAGCAGC TAGCGCCAAG GCTGATGGAG CTGTTTGGGA TAAGGAGGTG GCGCATCGTA
GAGGTGAAGA GGGGCTCCGA GCTCTTCGGC CTCCGCTACA CGCACCCACT TGCTGAAGAG
GTGCCGGAGA GGGCGGGGAG GACATACACG GTGGTCACCG CCGATTTTGT GACTCTAGAC
CAAGGCACGG GACTTGTACA CATGGCGCCC GGCCACGGCC CCGAGGACTT CGAAGTCGCG
AAGAAGTACG GTCTCAGGGT TACTAACAGC GTGGAGATCA ACGGCATATA CAACGAAATG
GGCGGCAAAT ACGCTGGGAA GTATGTACAC GACGTAGATA AAGAAATCAT CGAAGACCTC
CGAAAGAAGG GACTCCTAGT CAAGGCGGAG GAGATAAAGC ATGAGTACCC CCACTGCTGG
AGGTGCGGCA CCAAGCTCAT ACTTAGGGCA GATAGGCAGT GGTTCATCGC TATATCTAAG
ATCAGGGAGC ACATGTACAA AGAACTAAGG GGGGTAAACG TGGTCCCCCA GAAGCTCAGG
GATAGATTCG ACATCTTTGT CCAAAACGCC CGCGACTGGA ACATCTCAAG GAGCAGGGTG
TGGGGCACCC CGCTCCCGAT ATGGCGCTGT AGAAAAGACG GGAGGATCCT CGTCGTGGGG
TCTCTGGAGG AGCTGAAGAG GCTGGCTAAG GAGCTCCCGC CAGTAGACGA CTTCTGGCTT
GTGCACAGGC CCTGGATAGA TAGAGTAGTG CTGAAGACCG AGGACTGCGA CGAGTGGGTT
AGAGAGCCCT ATGTGATGGA CGTGTGGCTA GACAGCGGAG TTGCTTGGAT CGCAGCCGTA
GACGGAGAGA GAAACGGAGA ACTCTGGTCT AGGCTGTTCC CATACGACTT CGTAACAGAG
GGCATAGACC AGACCAGAGG GTGGTTCTAT TCGCTACTGG CCTCCGCGAT GGTTTACGTC
GGAAAGGCCC CATACAAAAC CGTATTGATC CAGGGCCTCA TCCTAGACAA ACACGGCCAG
AAGATGTCTA AGAGCAAGGG CAACGTCATA TGGGCGAGGG ACCTCTTTGA GAAATACGGC
GCGGACCCGG TCCGGCTCTA CATCCTATCG AAGGCGGCCC CCTGGGAGGA CCTTGCCTTT
GACCCCGACG AGGTGAAGAC CACAATAAGC GATTTAAACA TCCTATGGAA CGTCGTAAAA
TTCGCAGACA CCTACATGGC GCTAGACGGC TTCACAGCCG AGAAGTACCC ACTCGAGAAG
TGGCTCAGTA AGGCGCTAGA GGAGGATAGA TGGCTGCTCT CCGAATTCAA CCAGCTTGTG
GAGGCGTTTA CACAATACAT GAAAAACTAC GAGTTCCACA AGGCCGCCAA CCTCTGGAGA
GAGTTCGTTG TCGAGACGCT CAGCCACCGC TACATAAGAC TACTACGTAG GCGCGTCTGG
AGCGAAGAAC CAAGCGACGA CAAATACGCA GCATACGCCG TCTTACACCA CGTGCTGAAA
AACGTGATAG TACTCGGCTC TATATTTACG CCCTTTGTGG CGGAGTACCT ATGGCAGGCC
TACGTGAAAA AGTACGAAGG TGGAGCCGCC GAGTCGGTGC ACCTCGCGAG CTACCCAACC
GCGGGCCCCA TCGAGAGAGA GCTGGTGGAC GCCTTCCGCG AACTGTTCAC GGCTTTTTCA
GCCCTAGCCG AAGCCAGAAA CAGAGCCGGT ATAAAACTCC GCTGGCCGAT AAGAGAGGTC
TACATAAACG GCGGAAGATA TCTCGATAGA TACAGGGAGC TTCTGAAATA CCTCGGCAAC
GTGAAAGAGG TGAAGACGGG GAGTTGCCCC AGTGGATATG TAAAAGCCTC TGAAGACGCC
GTCGAGGCTT GTATACCCCC CAAGCTTGAG CCAGAGCTTT ACTACGAGGC GTTGGCTAGG
GAGATCGTCC GCAGGATCCA GGTGATGCGT AAGGAGGCTG GGCTAGAGAT AAACGACATG
ATCAAGGTCG CCGTTGGCAC CAAGTCGGAA GACGTCAGAA AGGCTGTGGA GACGCTTAAG
GACTACATAC AGCGGGAGAC CCGTGCAGTG GAGCTGACTA TTGGAGAGGA AGTAGACGGC
AAGGTGTGGG AGATATCAGG CGAAAAGGTG GCCATAGCGA TAAGGAAGGC CTAG
 
Protein sequence
MSRGDFKLQP TYVPYEVERR VLEYWRTNGI FQKWKSWRGG PIFAFLEGPP TTNGMPHVGH 
VRGRTYKDVV LRFHRLLGYD VWPQGGWDMQ GMPVEWEVEK RLKLRSKKEV ERYGLEQFAK
KCNELVEEYL TYWREWGTER LGLWLDVENA YETRQPTYIE YAWRVIKKAY ERGLLVEDYR
VLWFCPRCET SLSDHEVALG YEERRDPSIY VKFRVEGRGD EYLVIWTTTP WTLVDNEAVA
VHPEYAYAKV EVENGEKWWV AEQLAPRLME LFGIRRWRIV EVKRGSELFG LRYTHPLAEE
VPERAGRTYT VVTADFVTLD QGTGLVHMAP GHGPEDFEVA KKYGLRVTNS VEINGIYNEM
GGKYAGKYVH DVDKEIIEDL RKKGLLVKAE EIKHEYPHCW RCGTKLILRA DRQWFIAISK
IREHMYKELR GVNVVPQKLR DRFDIFVQNA RDWNISRSRV WGTPLPIWRC RKDGRILVVG
SLEELKRLAK ELPPVDDFWL VHRPWIDRVV LKTEDCDEWV REPYVMDVWL DSGVAWIAAV
DGERNGELWS RLFPYDFVTE GIDQTRGWFY SLLASAMVYV GKAPYKTVLI QGLILDKHGQ
KMSKSKGNVI WARDLFEKYG ADPVRLYILS KAAPWEDLAF DPDEVKTTIS DLNILWNVVK
FADTYMALDG FTAEKYPLEK WLSKALEEDR WLLSEFNQLV EAFTQYMKNY EFHKAANLWR
EFVVETLSHR YIRLLRRRVW SEEPSDDKYA AYAVLHHVLK NVIVLGSIFT PFVAEYLWQA
YVKKYEGGAA ESVHLASYPT AGPIERELVD AFRELFTAFS ALAEARNRAG IKLRWPIREV
YINGGRYLDR YRELLKYLGN VKEVKTGSCP SGYVKASEDA VEACIPPKLE PELYYEALAR
EIVRRIQVMR KEAGLEINDM IKVAVGTKSE DVRKAVETLK DYIQRETRAV ELTIGEEVDG
KVWEISGEKV AIAIRKA