Gene Tneu_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0670 
Symbol 
ID6165304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp602386 
End bp604344 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content57% 
IMG OID641667823 
Producttype III restriction protein res subunit 
Protein accessionYP_001794055 
Protein GI171185136 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGTT TCAGCGTTGT GGTCAACGGC GTTGAGGTTG TTAGAGAGTG GGGGTGGGAC 
CGCATTTCTA GCGTGAAGGA GGAGCTGAAG AGGTTGGGCT TTAGGTGGGA CGGCGCCAGC
TGGAGGGGGA GGACCAGAGA CCTCGGCGTT TTAGCGAGGC TGAGACAACT GCTTGAGCTA
AGCCAAGAAG AGTACGTGTC GATTCTTTCA ACAGTCGCCT ACGACGTCTC CGGCGGCGCC
GTGCTTGTGG TGGGCGCGCT TCCGGAGGAG CTAAAAAGCC ATGTGATCTC CAGCGAGGGC
GACGTCCATC TGGTGTCTCT CTCTGGGTTC CTCCGTAGGT TTATAGCCGA GGGCAGAGGC
GTGGGCCGCG TCTCCACCTT CGAAGAATTT GTGGAAGAGG GCGGCGAGAG GCTTAGGGCC
GTACTTAGGG GGGTGCAGAC GCTTGGGGAC GTAGACGCCG CGTTGAAAAG CGCGAAGGAG
CTTGTACTTT CGTCGGATAA ACTACGCGAG CTGTTTATCC GACGGAGGAG GTGGTGGACC
GCCTCAGTTG GCCTAAACTA CGCCAGGGTT AACTTCCTCG CCTCAGGTCT CTTGAAAAAG
TTGGGAGAGG TCAAGCTCAG ATACAACGTA GTCAACAAAG AGGGCGAGTT GGAGGAGCGG
GATATAAAGC TCGTTAAAGT AGCTCGAGAG GGGAGCTCCC ACCTGTTGAA GTTCCCCGTC
TTCGTTAGAG GTAGAGTTGC CGAAATTCTG GAGGAGTTTG GCTACGCGGT TGAATACGTA
GGCGTTGAGC ACCCGCGTGT GGCATACAAG AGGTCCTTTT CCCTATATCC CTTCCAACAA
GAGGCCGTGG AAAGGTGGGT TTCAAGCGGC ATGAGGGGTA CCGTGGTCAT TCCCACGGGA
GGCGGCAAAA CCTTTATCGG TCTAGATGCG ATGTATAGAG CCGGCGTATC CGCCCTAGTC
CTGGTGGTCA CGCGGGAGCT CGCTCTGCAG TGGGTTGAGC GTATCAGACG CCACTTAGGC
ATATCGCCGG GTATGCTTGG AGGCGGCGCT AGAGAGGTGA GGGAGGTCAC CGTCGCTATA
TACAACTCCG CGGTTAAGTA CATAGAGGAT CTCGTGGGGA GGTTTGGGTT GGTTATTTTC
GACGAGGCCC ACCACGTCCC AGCCGAGACC TTTAAAGAGG TGGCGCTTGG CCTAGATTCG
CCCTATAGGC TCGCCCTCTC GGCGACGCCG GAGAGGGAGG ACAAGAACGA ACACCTTATC
TTTGAGTCGG TGGGACCTAT CGTATACAGA GCCTCCTACC GCTCCATGGT GGAGGCCGGC
CTCGTCGTGC CTGTGGAGCA CTATAGAGTC TATATTAGGC TGTCCGAAGA GGAGGAGGCG
GCTTACCGTA CTCTGCCGAA CGACAACGTC ATAGTTCTGA GGAACACGGC CGCGAAAAGC
GCCAGGAAGA TAGAGGCGGC TTTGCGCATT ATAGCTAGGG AGGTCTCCCT TGGGTCTAAG
GTGTTGGTGT TTACCCAGTT TATCGACCAG GCCGAGGAGC TCCATAGGAG GATAAGGGAG
TTGGGCATTT CTGCCGAGCT TATAACTTCA GAGGAGGGGA ACCGGGAGAT CTCGCTTAGG
CGGTTCAGCT CCGGCGTCAG CAGAGTTGTT GTTACTACGA CGGTTCTTGA CGAGGGCGTC
GACGTGCCAG ACGCAGAGGT CGCGGTGGTT GTGAGCGGCA CTGGATCGAA GAGGCAGATG
ATCCAACGCG TCGGCCGCGT GGTCAGAGCC GCCCCCGGCA AAAAAGTTGC TAGGGTCTAC
GAGCTCGTTG CAAGGGGGAC CGTAGAGGAG GCTCTATCGG AGATGCGCCA CTTCGACGAT
GTAATAGAGG AGACCATCTG CAGAAGGGTC ACAGAGCAGG ACCTAGACGC GATTCTGAGG
AAGGTCGCCC CCCTAACTAC ATGGCTTAGG AGAAGCTAG
 
Protein sequence
MPRFSVVVNG VEVVREWGWD RISSVKEELK RLGFRWDGAS WRGRTRDLGV LARLRQLLEL 
SQEEYVSILS TVAYDVSGGA VLVVGALPEE LKSHVISSEG DVHLVSLSGF LRRFIAEGRG
VGRVSTFEEF VEEGGERLRA VLRGVQTLGD VDAALKSAKE LVLSSDKLRE LFIRRRRWWT
ASVGLNYARV NFLASGLLKK LGEVKLRYNV VNKEGELEER DIKLVKVARE GSSHLLKFPV
FVRGRVAEIL EEFGYAVEYV GVEHPRVAYK RSFSLYPFQQ EAVERWVSSG MRGTVVIPTG
GGKTFIGLDA MYRAGVSALV LVVTRELALQ WVERIRRHLG ISPGMLGGGA REVREVTVAI
YNSAVKYIED LVGRFGLVIF DEAHHVPAET FKEVALGLDS PYRLALSATP EREDKNEHLI
FESVGPIVYR ASYRSMVEAG LVVPVEHYRV YIRLSEEEEA AYRTLPNDNV IVLRNTAAKS
ARKIEAALRI IAREVSLGSK VLVFTQFIDQ AEELHRRIRE LGISAELITS EEGNREISLR
RFSSGVSRVV VTTTVLDEGV DVPDAEVAVV VSGTGSKRQM IQRVGRVVRA APGKKVARVY
ELVARGTVEE ALSEMRHFDD VIEETICRRV TEQDLDAILR KVAPLTTWLR RS