| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0553 |
|---|
| Symbol | |
|---|
| ID | 6166158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 504830 |
|---|
| End bp | 506011 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641667706 |
|---|
| Product | phosphate ABC transporter, periplasmic phosphate-binding protein |
|---|
| Protein accession | YP_001793942 |
|---|
| Protein GI | 171185023 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00975] phosphate ABC transporter, phosphate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000044949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000729541 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGTGG TTTTGGCGGC GGTGGTGGGG GCGGTGGCGG CGTTGCTGGC GGTGGGGGCT
GTGTTTTTTC CGCCGAAGTG TCTGGCGGCG TCTGGCGGCG GGGGGGTTGC GCTGGGGGTT
AGGGGGACTT TGGTGGGGGG TGGCTCGTCT TTTGTGGCTC CGCAGATGTT TGCCTGGTCT
AGGGAGTTCT ATAGGCTGAG CGGGGGGGCG GCGGTGGTTA ACTACCAGTC TGTGGGGTCT
GGGGCTGGGG TTGCGCAGCT TCTGGAGAGG AGGCTTGACT TCGCCGCCTC TGACGTGCCT
CTGCCGCGGG ATAGGTACGC CGCCGTGGGG GGTCGGGTTT TCCAGTTTCC CGTGGCTGTG
GGCTCTATCG TGGTTGCCTA CAACGTCCCG GAGGTGGCGT ATGGGGTGAC GGGGAGGTAT
CTGAACCTGA CGGCTGAGGT TCTGGCGTTG ATCTACATGG GGGTTGTTAG GCAGTGGTGT
GACGTTAGGA TTAGGGAGCT CAACCCGGGG CTTGCGGATA GGCTGCCGTG TAGAGATATC
GTGGTGGTGC ACAGGAGCGA CGGGTCTGGG ACAACTGCGG CGTTTACCCT CTTCCTCTCC
AAGGCCTACC CGCCGTGGAA CAGCACGGTG GGGTGGGGGC TGGTGGTGAG GTGGCCTGTG
GACGCGGTGG GGAGGGGGGT GGGGGCGAAG GGGAACGAGG GGGTTGCGCA GGCGGTACTG
CAGAACGCCT ACTCCATCGG CTATGTGGAG TACGCCTACT GGGTGAAGAA CCGGGGGAGG
TTCGACGAGG TGGGGGGCGT GGCGTATGTG CGGAACGACA ACGACGGCAG GTTCTACTTC
CCCACTGCCG AGTCCGTTTC GGAGGCCGTG TCGGCCGGCC TTGAGAGGTA TTTGGCGAAA
CACGGCGCCC CGCCTGGCCC CGGCGACGAC TGGAACCCCG TTTCTGTGGA GTTTTCCAAC
CCGCCGCGGG GCTACCCCCT GGTGACTTTC ACCTACGCCG TGGTGTGGAG GGACTACTCC
GCCGAGGGGT ACAGCGGCGC TGGTGTGAAG ACGCGCCTCC TCAAGGCCTT CTTCAGGTGG
GTTCTCACGG AGGGGCAGGG GAGCCTGGTG GAGGGGTACA TCCCCCTCCC CAGGGAGGTG
GCCGAGGTGG GGCTTAGGGC TGTGGAAGGG GTGAGGCCGT AG
|
|---|
| Protein sequence | MRVVLAAVVG AVAALLAVGA VFFPPKCLAA SGGGGVALGV RGTLVGGGSS FVAPQMFAWS
REFYRLSGGA AVVNYQSVGS GAGVAQLLER RLDFAASDVP LPRDRYAAVG GRVFQFPVAV
GSIVVAYNVP EVAYGVTGRY LNLTAEVLAL IYMGVVRQWC DVRIRELNPG LADRLPCRDI
VVVHRSDGSG TTAAFTLFLS KAYPPWNSTV GWGLVVRWPV DAVGRGVGAK GNEGVAQAVL
QNAYSIGYVE YAYWVKNRGR FDEVGGVAYV RNDNDGRFYF PTAESVSEAV SAGLERYLAK
HGAPPGPGDD WNPVSVEFSN PPRGYPLVTF TYAVVWRDYS AEGYSGAGVK TRLLKAFFRW
VLTEGQGSLV EGYIPLPREV AEVGLRAVEG VRP
|
|---|
| |