| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0541 |
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| Symbol | |
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| ID | 6165665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 492822 |
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| End bp | 494807 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641667694 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001793930 |
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| Protein GI | 171185011 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000690617 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTAAGG TGGCGGTGAT CGGCGCGGGG ACGATGGGGC ACGGGATCGC AGAGCTCTTC
GCGATCGCGG GTTACGAAGT GGCGCTTGTG GATGTGGCAG AGGAGTACCT CAAGAGGGCC
CTCCAGAACA TCGAGTGGTC TCTGAGGAAG CTCGTGGAGA AGGGCCAGGT GAGGGAGGAC
GTCCAGACGG TCATGTCGAG GATAAAGACC GTCGTCAACG ACGTGTGTAA GGCCGTGGAG
GGGGCCGAGC TCATGGTGGA GGCGGTGGTG GAGAACCTGG AGATCAAGAG GAAGGTCTTC
GCCGAGGCCG ACAGATGCGC CCCGCCAGAC GCGGTGCTCG CCACGAACAC CTCCTCTCTG
CCCATCACGG AAATCGCCGA GGCTGTGAAA CCCGAGAGGA GGGGGCGGGT GGTGGGGATG
CACTTCTTCA ACCCACCGCC CCTCATGCCA CTTGTGGAAA TCGTGAGGGG GGCCCACACC
AGCGACGACA CCGTTAAAAA AGTCGCCGAC TACGCGGCTA AGCTCGGGAA GCAGACCGTG
GTGGTAAACA AGGACGTGCC CGGCTTCATC GTAAACAGGA TATTCATGAG GGTAAACGAG
GCGGCGTGTT GGACGGCGGC GCGCGGCGAA GCCACTATCC AGGAGGTAGA CGCGGCGCTT
ATCTACAAGG CGGGTCTCCC AATGGGGGCC TTCGTCCTAA TGGACTACAC CGGGCTAGAC
GTCGTCTGCT TCATAGCCGA CTCCATGGCT AAACGCGGCT ACAGATCAAG GCCCTGCCCC
CTCCTCCAGG AGCTGTGCCA GGGAAAGAAA TACGGCGTAA AAACCGGCGA GGGGTTCTAC
AGGTACCCAG CCCCCGGCAA GTACGAAAAG CCCGCCCTGC CCAAGGAGGC GGCGGAGAGG
GTCGACCCGG TGGACCTCCT GGCGCCCGCC ATAAACGAGG CGGCTTACCT CCTCCGGGAG
GGCATAGCGA CGAGGGAGGA CATAGACAAG GCTGTGAGGC TTGGCTTAAA CTGGCCGAAG
GGACCGCTGG AGTACGCGGA CGAGGTGGGG ATCGACGCCG TCGTAAAAGC CCTCGAGCGG
TGGAGGCAGA GGGGCTTCGA GGAGTATGCC CCAGACCCTC TACTCGCAGA GCTAGCCGCC
GGGGGGAAGC TGGGCAAGAA GACGGGGGAG GGGTTCTACA AGTACGTCAA GGCTGAGGAG
AGGCGGCTCG AGACAATTGT GGTCCGCTTC GAGCCCGGCG TGGCCTGGAT TGTGCTAAAT
AGGCCGGACC GCCTAAACGC CATAAGCCCC AAGATGGTGG AGGAGCTCTG GCGGACTCTC
GACGAGATAG AGCAGATGGA CTACGACAAG GTAAGGGTGG TCGTGATCAC GGGCTCCGGG
AGGGCCTTCT CCGCGGGGGC CGACGTGTCC GGTTTCGCCG GCGCGAGCCC AATCGCCATG
TTTAAGCTCT CCCGGAGGCT ACAGATGCTG GCGGACAGGA TCGAGCTCCT CGACCGGCCG
GTGATATGCG GCATAAACGG CTACGCGCTG GGCGGCGGGC TGGAGCTCGC CATGGCATGC
GACATAAGGA TAGCCGCCGA GACCGCGGAG CTGGGGCAAC CCGAGGTGAA CCTCGGCTTT
ATACCCGGCG CCGGGGGGAC CCAGCGTTTG GCGAGGCTCA TAGGCAGAGA TAGAGCTAAG
GAGCTCATCA TGACCGGCGA GAGGATACCT GCGAGGGAGG CGGAGAGGCT GGGGCTTGTA
AACAGGGTGG TGCCCCCGGA TAGGCTGGAG CAGGAGCTAA GGGCGGTGGC CAACAAGCTG
GCCGAGAAGC CGCCTCTGGC GTTGGCGATG GCCAAATACG CGGTGAACTT CGGCGTAGAG
ATCCCTCTGT GGGCCGCCGA GGTGCTTGAG GCGGCGGAGT TCGGGCTACT CTTCAGCACG
AAAGACGTGG CCGAGGGGGT AGCCGCCTTC CTACAGAAGA GGAAGCCGCA GTTTAGAGGA
CACTGA
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| Protein sequence | MGKVAVIGAG TMGHGIAELF AIAGYEVALV DVAEEYLKRA LQNIEWSLRK LVEKGQVRED
VQTVMSRIKT VVNDVCKAVE GAELMVEAVV ENLEIKRKVF AEADRCAPPD AVLATNTSSL
PITEIAEAVK PERRGRVVGM HFFNPPPLMP LVEIVRGAHT SDDTVKKVAD YAAKLGKQTV
VVNKDVPGFI VNRIFMRVNE AACWTAARGE ATIQEVDAAL IYKAGLPMGA FVLMDYTGLD
VVCFIADSMA KRGYRSRPCP LLQELCQGKK YGVKTGEGFY RYPAPGKYEK PALPKEAAER
VDPVDLLAPA INEAAYLLRE GIATREDIDK AVRLGLNWPK GPLEYADEVG IDAVVKALER
WRQRGFEEYA PDPLLAELAA GGKLGKKTGE GFYKYVKAEE RRLETIVVRF EPGVAWIVLN
RPDRLNAISP KMVEELWRTL DEIEQMDYDK VRVVVITGSG RAFSAGADVS GFAGASPIAM
FKLSRRLQML ADRIELLDRP VICGINGYAL GGGLELAMAC DIRIAAETAE LGQPEVNLGF
IPGAGGTQRL ARLIGRDRAK ELIMTGERIP AREAERLGLV NRVVPPDRLE QELRAVANKL
AEKPPLALAM AKYAVNFGVE IPLWAAEVLE AAEFGLLFST KDVAEGVAAF LQKRKPQFRG
H
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