Gene Tneu_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0492 
Symbol 
ID6165696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp448297 
End bp448989 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID641667649 
Productnucleotidyl transferase 
Protein accessionYP_001793885 
Protein GI171184966 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000162703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGGCTG TGATTCTGGC GGGCGGGTTC GGCAGGAGGC TCGCCCCCCT CACCAACGAG 
GTGCCCAAGC CCCTCGTGCC CGTGGCCGGG AAGCCCATCC TCGTGTGGCA GATCGAGTGG
CTGAAGAGGC AGGGCGTCAC AGACATAGTC CTCGCCGTGG GGTACCTACG CCACAAGATC
TTCGAGGCGC TGGGCGACGG GCGGAAATAC GGCGTCCGCC TCTTCTACAG CGTCGAGGAG
GAGCCCCTCG GCACCGGAGG CGCCATAAAA AACGCCGCTC CGTATATATC CGACGACGTG
TTCATCGCGC TAAACGGCGA CATAATCACA GACATAGACA CAAGGCCGCT GGCCGCCGCC
CTAGAAAAGG CAGACGCCGC CATAGCCCTC GTCCCCCTCA GAAGCCCCTA CGGCGTAGTG
GAGGTAGACG GCGAAGGCCG CGTGATGGCC TTCAGAGAGA AGCCCGTGCT GGAGCACTAC
ATCAACGCCG GCGTCTACGC CATCAGGAAG GAGGCGCTAA GGGACCTCCC CGACAGAGGC
AACATAGAGG AGACCCTCTT CCCCAAGCTG GCCCAACAGG GCAGGCTCAG AGCCGTAGTC
TACAAAGACG CCTTCTGGCG CTCCATAGAC ACACACAAAG ACCTAGAGGA GGTAGAAAAA
ATGTTAAAAA CCGGGCCGGG AGGCGGGCCA TGA
 
Protein sequence
MRAVILAGGF GRRLAPLTNE VPKPLVPVAG KPILVWQIEW LKRQGVTDIV LAVGYLRHKI 
FEALGDGRKY GVRLFYSVEE EPLGTGGAIK NAAPYISDDV FIALNGDIIT DIDTRPLAAA
LEKADAAIAL VPLRSPYGVV EVDGEGRVMA FREKPVLEHY INAGVYAIRK EALRDLPDRG
NIEETLFPKL AQQGRLRAVV YKDAFWRSID THKDLEEVEK MLKTGPGGGP