Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0330 |
Symbol | |
ID | 6165141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 285805 |
End bp | 286572 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641667491 |
Product | ABC transporter related |
Protein accession | YP_001793727 |
Protein GI | 171184808 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00533826 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCGAGA TTAGGGGCGT GAAGGTGAGG GCGGGGACCT TCGAGGTCCT CGCGGAGGGG GCCGAGGTGG TGGGAAAGGC GGTGCTACTG GGGCCCAACG GCTCTGGGAA AACCACCTTG TTGAGGGCTG TAAGCGGGGT GATCCCCTAC GAGGGTAGCA TCAAGATCGA CGGCGTTGAG GTGGACTCCG CCAGGGGGCT CCACACAGTT TCGTCGAATC TCCCCGAGAT ATACCGCATT GCCTACGACG TGGCGGGGCT CCTGGAGGTG TTTGAGGACT TGAAGGGCGT TGACCGGGGC GAGTTCGAGG CCCTCATGGG GCGGCTGGGG CTGGGGCGCG AGGTCATGAG GAGGCCGGTG CACGCCCTCT CGGCCGGCCA GTGGTCTCTT GTGAGGCTCG CCCTCGCCCT GTCCTCTAGG CCGAAGACCA TCTTGGTGGA CGAGCCCTTC GAGAACGTGG ATCCCGCGAG GAGGAGCGTC GTGTTGAAGC TTCTGGTGGA GCGCGGGGAG TCTGGAATCG TCGCCACCCA CGACCTCGAC GCCCTCAAGG CCATGAGGGG CTGGGACGCC TACTTCATGC TGGAGGGCAG ACTCTACGGC CCCGTCTCAG TCGACGATCT GCTGGCCTCG GGGCTGGTCA GAGGGAGGGC CGGCGGCGCT CTCCTAACGC TTAAGGTGGG CGGCGTGGAG TACTCGGTAG TCAAGGGCGC CGGGGTTAAG TTCGGCGAGA TGGGCACGGT GAACAGGATC TACGGCCTGG CGGAGTAG
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Protein sequence | MIEIRGVKVR AGTFEVLAEG AEVVGKAVLL GPNGSGKTTL LRAVSGVIPY EGSIKIDGVE VDSARGLHTV SSNLPEIYRI AYDVAGLLEV FEDLKGVDRG EFEALMGRLG LGREVMRRPV HALSAGQWSL VRLALALSSR PKTILVDEPF ENVDPARRSV VLKLLVERGE SGIVATHDLD ALKAMRGWDA YFMLEGRLYG PVSVDDLLAS GLVRGRAGGA LLTLKVGGVE YSVVKGAGVK FGEMGTVNRI YGLAE
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