Gene Tneu_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0330 
Symbol 
ID6165141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp285805 
End bp286572 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID641667491 
ProductABC transporter related 
Protein accessionYP_001793727 
Protein GI171184808 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00533826 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCGAGA TTAGGGGCGT GAAGGTGAGG GCGGGGACCT TCGAGGTCCT CGCGGAGGGG 
GCCGAGGTGG TGGGAAAGGC GGTGCTACTG GGGCCCAACG GCTCTGGGAA AACCACCTTG
TTGAGGGCTG TAAGCGGGGT GATCCCCTAC GAGGGTAGCA TCAAGATCGA CGGCGTTGAG
GTGGACTCCG CCAGGGGGCT CCACACAGTT TCGTCGAATC TCCCCGAGAT ATACCGCATT
GCCTACGACG TGGCGGGGCT CCTGGAGGTG TTTGAGGACT TGAAGGGCGT TGACCGGGGC
GAGTTCGAGG CCCTCATGGG GCGGCTGGGG CTGGGGCGCG AGGTCATGAG GAGGCCGGTG
CACGCCCTCT CGGCCGGCCA GTGGTCTCTT GTGAGGCTCG CCCTCGCCCT GTCCTCTAGG
CCGAAGACCA TCTTGGTGGA CGAGCCCTTC GAGAACGTGG ATCCCGCGAG GAGGAGCGTC
GTGTTGAAGC TTCTGGTGGA GCGCGGGGAG TCTGGAATCG TCGCCACCCA CGACCTCGAC
GCCCTCAAGG CCATGAGGGG CTGGGACGCC TACTTCATGC TGGAGGGCAG ACTCTACGGC
CCCGTCTCAG TCGACGATCT GCTGGCCTCG GGGCTGGTCA GAGGGAGGGC CGGCGGCGCT
CTCCTAACGC TTAAGGTGGG CGGCGTGGAG TACTCGGTAG TCAAGGGCGC CGGGGTTAAG
TTCGGCGAGA TGGGCACGGT GAACAGGATC TACGGCCTGG CGGAGTAG
 
Protein sequence
MIEIRGVKVR AGTFEVLAEG AEVVGKAVLL GPNGSGKTTL LRAVSGVIPY EGSIKIDGVE 
VDSARGLHTV SSNLPEIYRI AYDVAGLLEV FEDLKGVDRG EFEALMGRLG LGREVMRRPV
HALSAGQWSL VRLALALSSR PKTILVDEPF ENVDPARRSV VLKLLVERGE SGIVATHDLD
ALKAMRGWDA YFMLEGRLYG PVSVDDLLAS GLVRGRAGGA LLTLKVGGVE YSVVKGAGVK
FGEMGTVNRI YGLAE