| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0199 |
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| Symbol | |
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| ID | 6165002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 176321 |
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| End bp | 177019 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641667364 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001793601 |
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| Protein GI | 171184682 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0957331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCTGC CTATACGGGA CGTAAACCCA ACTTCGACGT TTCCCCTGGT CACGAAAGCC
CTCGTCTTCG TCAACATCGC GGTGTTTATA TACGAGCTCA TGCGGCCCGA GGTGGTGGAC
CAGTACGCCT TCGTGCCCGC CCTGGCGTGG GAGGAGCCCT ACCGCTGGGT CACCCACATG
TTTCTCCACG GCGGCCTCCT CCACATAGTC GGCAACATGA TCTACCTCTG GGTCTTCGGC
GACAACGTGG AGGATCACTA TGGACACGGG CGTTTCCTAG CCCTCTACCT CCTCTGGGGT
CTCGTTGCGG CGTTTACCCA CTACTGGGCC TCGGCGGCGC AGGCCTCCAT GTTGGCCGCC
GCGGGGCCCT TTGGCAACCC CATGTACATG CCCGCGGTGG GGGCGTCGGG GGCGATCAGC
GGCGTCCTCG GGGCCTATAT GGTTCTCTTC CCCAGGGCCA GGATACTGAC CCTGGTCTTC
TTCGTGGTTA TCACGCTGGT GGAGGTCCCA GCCTGGGCCT ACATAGGCTT CTGGTTCCTC
TACCAGCTCT TCTACGGCTT CACGGAGCTG GTCACCCTCC AGGTGAGCGG GGTGGCCTAC
TTCGCTCACA TTGGCGGCTT CGTGGCGGGG GCCGCCACGG CGCTGGTGTA CAGGCGGAGG
AGGCGTGAGT ACTACTGGTG GTACCCCACG CCCTGGTGA
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| Protein sequence | MALPIRDVNP TSTFPLVTKA LVFVNIAVFI YELMRPEVVD QYAFVPALAW EEPYRWVTHM
FLHGGLLHIV GNMIYLWVFG DNVEDHYGHG RFLALYLLWG LVAAFTHYWA SAAQASMLAA
AGPFGNPMYM PAVGASGAIS GVLGAYMVLF PRARILTLVF FVVITLVEVP AWAYIGFWFL
YQLFYGFTEL VTLQVSGVAY FAHIGGFVAG AATALVYRRR RREYYWWYPT PW
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