Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0188 |
Symbol | |
ID | 6165049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 167418 |
End bp | 168101 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641667353 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001793590 |
Protein GI | 171184671 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.620509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGT TGGAGACGCT TAGGAGGAGG GCTGTGGTGG GGCACAGGGG CTACCCAGCT AGGGAGCTGG AAAACACCCT ACAGTCGATA GAGGCAGCCA TCGCCCACGG CGCCGACGCC GTCGAGGTAG ATGTACAGGT TACGGCAGAC GGCGTGGCTG TGTTAAGCCA CGACGACACT CTGGAGAGAA CCTTCGGCCT GCCGCTTAAC GTCAGACAGG CGGCGTGGGA AGAGGTGAAG AAGGTGGAGA GGGGGAGGTA CCGCGTCCCA ACCCTAAGAG AGGCGCTGGA GCTTGTGGCA GAGCGCGTCG GGGTGTTGGT GGAGGTGAAG CACCCAGAGG ATGCCCACAT AGTGGCTAGA ACAATCAGGG AGGCGGGCGC CGCCAGATGG ACGGCCGTCA TAAGCTTCCA CGAGGAGGCG CTTAGGGGGG TCGACCTCTA CCGGGGGCTC ATATACGCAA AGCCCCCGGG CCGCGTCGTC GACGCGAAGA GGCTCGGCTG CCATATAGTG CTCCCACACC ACGCCCTGGC CACGGAGAGG GCTGTGGCTC TAGCGCACAA GATGGGTCTC TACGTCGTGG CGTGGACGGT GAACAGCCCA GCGACGGCAA GAAGGCTGTG GGAGATCGGC GTCGACGGAG TGGCCACAGA CGACGTTGAA AATATAAAGG CGGTTTTGAG TTAG
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Protein sequence | MDLLETLRRR AVVGHRGYPA RELENTLQSI EAAIAHGADA VEVDVQVTAD GVAVLSHDDT LERTFGLPLN VRQAAWEEVK KVERGRYRVP TLREALELVA ERVGVLVEVK HPEDAHIVAR TIREAGAARW TAVISFHEEA LRGVDLYRGL IYAKPPGRVV DAKRLGCHIV LPHHALATER AVALAHKMGL YVVAWTVNSP ATARRLWEIG VDGVATDDVE NIKAVLS
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