| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0183 |
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| Symbol | |
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| ID | 6164720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 161865 |
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| End bp | 163280 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641667348 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001793585 |
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| Protein GI | 171184666 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00355516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.949853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGTGC TCCACTTACA TCTGTATCAG CCGGAGAGGG CGGATCCGTG GCTCGAGGTG
ATTTTCCCGG AGCCCTCTGC CTCGCCTTAT AGGCACTGGA ACGAGCGGGT GTCTTACGAG
TGCTATGAGC CAAACGCCGA GTTGGGCAAC TACAGGTGGG TTAGCTTCGA CGTGGGGCCA
ACCCTGCTGA GTTGGCTTAG GCAGAACAAG CCGCTTGTCT ACATGGCTCT TCTCGAGGCA
GACAAGGCGG GGGCCGAGCG GTGGGGCCAC GGAAACGCGC TTGCGCATCC CTACTACCAC
GTCATCCTCC CGCTCCTCCC CAGGCGTGAT CGGGATGTGC TGATCTACTG GGGGGTGGAG
TACTTCAAGA GGCACTTCAG GAGGAGCCCC GAGGGCATGT GGCTACCTGA GATGGCGGTG
GATCTCGAAA CGCTTGAGGT GTTGGTCGAC AACGGCATCT CCTACACGGT GCTTACGCAG
AGCCAGGTGA AGGGCGGGAG GCCGGGCGGC CCCTATAAGG TGGTTCTGCC GAGCGGGAGG
AGCATCGCGG TTTTTGTAAG AGACGAGGCG CTTTCCAACG CGCTGGCCTT CGGCGGCTTC
GGCAGATTCA TGGAGATGCT GGGCGGGTCC AGGGAGGCCA TAATCGCTCT AGACGGCGAG
ACCTTCGGCC ACCACATCAA GGGCGCGGAG AGGGACCTAG CCCAGTTCAT AGCGAGGAGG
GGGGATGAAA TGGCGAACCT CGGGAAGCTC TACGAGGGGG GCTACCGCGG CGAGGTGGAG
ATAGTGGAGA AGACGTCGTG GAGCTGCCCC CACGGCTTGG GCCGGTGGAG TAGAGACTGC
GGTTGCGACG GCCCAGCCCC GTGGAGGGAG GCGCTGAGGA AGCTGGTGGA CTGGGTGGGC
GAGGTCGTCG ACAAGGCGTT CGAGGAGAGG TTGGGAGGGA GGGGATGGGA GTTGCTGAGG
AGGTACATAG ACGTCATCCT AGGCGGGGAC AACTCGGGGT ACGGAGTGGA GGAGCTAAGA
CTCCTCGAGG CGGAGAGGGC TAAGCTCGCG GCTAACACAA GCGACGCATG GTTCTTCGCC
AGAGTAGGCA TCGAGTTCGG GATAGCGGTA AAGTGGGCGT TGCGGGCGGT GGAGCTACTA
GGCGACGCGG CGCTCATGGA GCAGTTCATG AGGCGCCTCG GCGAAATCCC GATAGATGGC
GAGACGGCGC TAGCCTACTG TCCCAGGATC AGAGGGCCTC TGGTCGCCGC CGCCATGTAC
ATCTCCCTGT CGATGTCTGG GCGGCCGCCG GAGAGGGTCG GCCCCTACGT CTTTAGACAT
ATAAACGACG AGTTCGAAAT AGTCGACACG AGAACCAGGG AAGTCTTCCG CTTCCGCCAC
GACCTGCTCT GGAGCCGACA AGGCTTCCCA AGCTAA
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| Protein sequence | MIVLHLHLYQ PERADPWLEV IFPEPSASPY RHWNERVSYE CYEPNAELGN YRWVSFDVGP
TLLSWLRQNK PLVYMALLEA DKAGAERWGH GNALAHPYYH VILPLLPRRD RDVLIYWGVE
YFKRHFRRSP EGMWLPEMAV DLETLEVLVD NGISYTVLTQ SQVKGGRPGG PYKVVLPSGR
SIAVFVRDEA LSNALAFGGF GRFMEMLGGS REAIIALDGE TFGHHIKGAE RDLAQFIARR
GDEMANLGKL YEGGYRGEVE IVEKTSWSCP HGLGRWSRDC GCDGPAPWRE ALRKLVDWVG
EVVDKAFEER LGGRGWELLR RYIDVILGGD NSGYGVEELR LLEAERAKLA ANTSDAWFFA
RVGIEFGIAV KWALRAVELL GDAALMEQFM RRLGEIPIDG ETALAYCPRI RGPLVAAAMY
ISLSMSGRPP ERVGPYVFRH INDEFEIVDT RTREVFRFRH DLLWSRQGFP S
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