Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0142 |
Symbol | |
ID | 6164705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 129868 |
End bp | 130500 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641667308 |
Product | abortive infection protein |
Protein accession | YP_001793545 |
Protein GI | 171184626 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0827934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCAAC AGGTTAAAAA ACGTTGCATA GCAACGGCCG TGATACGGAG GATCTACCTC CCGGCCGCCT TCGCGGCGCT CGTCGCCGCG CTCGTAGCTC TGAAGCCGCC GGCGTGTGTC GCCCTCTACG CAGGGGCGGC CGTATACCTT GCCTTCGCCC CTGCGGGGGC GCTGGTTAGG TGGAGGCTAG ATAGGAGGTT CCCCCTCGCC TTCGCTGTTT ACCTCCTCTC GCTAGTCGCC GCCGGCGCCG TAGCGGCGGC AGTCCCGCCT ATACGCGCCG ATTACGTCAA ACTAGGCGAG GCGCAGGCGA GGTTCTTCGC CGAGGCAACC ACGTGTCCAA TGGGCTGGGC CCTCGTCTTC CTCCAAGCGC TGGTTCTGGC GCCTCTGGTG GAGGAGATGC TCTTCAGGGG CATAGTCTTC GAGGAAGTGA AGGGGAGGCT CGGCCCGGCT GCGGCCTACG TCGTATCCTC TCTGGTGTTC GCCATATTGC ACAAGCCGGG GCTCGCCGCA GTGCCCATAT TCATAGTGGC GTTGGCCCTC GCCTTCGCCT ACGACAGATA CGGCCTCCCC GCCTCCATCC TGCTACACTT TCTGCAGAAC GCGGCGGCGC TCTGGTTAAC CAAAGGCGGT TGA
|
Protein sequence | MAQQVKKRCI ATAVIRRIYL PAAFAALVAA LVALKPPACV ALYAGAAVYL AFAPAGALVR WRLDRRFPLA FAVYLLSLVA AGAVAAAVPP IRADYVKLGE AQARFFAEAT TCPMGWALVF LQALVLAPLV EEMLFRGIVF EEVKGRLGPA AAYVVSSLVF AILHKPGLAA VPIFIVALAL AFAYDRYGLP ASILLHFLQN AAALWLTKGG
|
| |