Gene Tneu_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0096 
Symbol 
ID6164580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp82312 
End bp83787 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content61% 
IMG OID641667263 
Productcarboxypeptidase Taq 
Protein accessionYP_001793500 
Protein GI171184581 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2317] Zn-dependent carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.116202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00735546 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTAGGT CTCAAACCGT CAAGGAGATC CTGGACCACT ACAGGGTTAT ATGGGCGTTG 
GGGCACGCCC AAGCGCTGAT GGGCTGGGAC TCGGAGACGT ACATGCCGGA GGAGGGGGTC
AAGGGGCGGG CCGCCGCCAG GGCCGAGATC GCGCAGCTTA TTCAGAGGTT TATGCTTGAT
GAGAAGTTCG TCAAGCTCTT GGATAAGGCC GAGGAGGAGA GGGATCTCAC AGACGTGGAG
AGGGGCATCG TCCGGGTGCT CAAGAGAGAT CTGAGGTTCT ACACCAGGGT GCCCCCCGAG
GTGGTGAAGG AGCTCGCTAA GGTCACCTCC GAGGCTTTTG TGGCGTGGAG GGGGGCCAAG
GAGAAGGCCA GGTTCGACCT CTTCGCGCCT TATCTGGAGA AGATAGTTGA GCTCTCCAGG
GTGGTCGCCG AGAAGCTCGG CTACGAGGAG CATCCCTACG ACGCGCTCCT CGACCTATAC
GAGGAGGGGC TTACGTCGAG AGACGTGGAG TCGATATTCT CCACCCTGGA GCCCGGCATA
AGGTCGCTCC TCAACAAGCT GGAGGCGAGG GGGTGGCCCA GAAGCCACCC GCTTGAGGAG
GCTCCCTACG ACAGGCCTGC CCTCGAGGCC GCCATTGCGG AGGTGCTTGA CCTCCTCGGC
TACCCCAGGG GGAGGTTCAG GGTGGACGTG TCGCCGCACC CCTTCACCAT CGGCATCGCG
ACGCCGTACG ACGTGAGGAT CACGGTTAGA TACAGGGGGG TCGACTTCAG AGAGCCGCTC
TTCTCGGCGC TCCACGAATA CGGCCATGCT CTGTATGAGC TAAACGTGGC GGAGGAGCTG
GCCATGACGC CCGTCGGAAC CGGCGTATCC CTCGGAGTGC ACGAGAGCCA GTCGAGGTTC
GTGGAGAACG TGGTGGGGAG GAGCCGGGAG TTTATACAGA GGATCTCCCC GATATTGAGG
AGGCGTCTCC CCCTCCTCTC GAAGTACGGC GACGAGGATC TGTTCTACTA CTTCAACCTG
GTTAGGCCGA GCCTGATACG TACAGAGGCC GACGAGGTGA CCTACAACCT ACACATACTC
CTGCGGTATA GGCTGGAGCG CCTCATGATA ACGGGCGAGG TGAAGGTGAG CCAGCTCCCC
GAGCTTTGGA ACAGCGAGAT GGAGCGGTTG CTTGGGGTAA AGCCGCGTAA CGACGCGGAG
GGGGTTCTGC AGGACGTCCA CTGGTCCCAC GGCTCGATAG GGTACTTCCC CACCTACACC
CTGGGGAACG TCGTGGCGGC TATGATCTAC TACAAACACG GCAACGTACG CGGCCTCGTC
TCAGAGGGCA ACTTCGCCGC GGTTAAGGAG TACCTCCGGG AGAAGATACA CAGGTGGGGT
AGCGTCTACC CGCCGAAGGA GCTGCTCAGG AGGAGCTTCG GCGAGGCGTA CAACGCCGGC
TACCTCGTGA AATACCTAGA GGAGAAGTAC CGCTAG
 
Protein sequence
MIRSQTVKEI LDHYRVIWAL GHAQALMGWD SETYMPEEGV KGRAAARAEI AQLIQRFMLD 
EKFVKLLDKA EEERDLTDVE RGIVRVLKRD LRFYTRVPPE VVKELAKVTS EAFVAWRGAK
EKARFDLFAP YLEKIVELSR VVAEKLGYEE HPYDALLDLY EEGLTSRDVE SIFSTLEPGI
RSLLNKLEAR GWPRSHPLEE APYDRPALEA AIAEVLDLLG YPRGRFRVDV SPHPFTIGIA
TPYDVRITVR YRGVDFREPL FSALHEYGHA LYELNVAEEL AMTPVGTGVS LGVHESQSRF
VENVVGRSRE FIQRISPILR RRLPLLSKYG DEDLFYYFNL VRPSLIRTEA DEVTYNLHIL
LRYRLERLMI TGEVKVSQLP ELWNSEMERL LGVKPRNDAE GVLQDVHWSH GSIGYFPTYT
LGNVVAAMIY YKHGNVRGLV SEGNFAAVKE YLREKIHRWG SVYPPKELLR RSFGEAYNAG
YLVKYLEEKY R