Gene Tneu_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0072 
Symbol 
ID6164947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp66715 
End bp67392 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content59% 
IMG OID641667237 
Productnucleotidyl transferase 
Protein accessionYP_001793476 
Protein GI171184557 
COG category[M] Cell wall/membrane/envelope biogenesis
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.155346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCCG TAGTCCTAGC TGCCGGCCTC GGCACGAGGC TAAGGCCGCT TACTTTCCTA 
GTCCCCAAGG CCCTCGCCAC GGTGGGGACG AAACCCCTCG TGGACTACGT AATCGAGTGG
CTTAGGTTAA ACGGGGTGAG GGAGATAGCT GTGGTGGGGT ACTACATGCA GGACGTGCTG
GAGAGGTACC TAGCCCAGTT TCACCCAGAC GTGGTCTTCC TCAGGTCGAG GAAGCTCCTC
GGCACTGCCG GCCAGCTGTA CTACGCGAGG GATTGGGTAG ATGGAGACGC CGCCGTGGTG
AACACAGACG TGTTAACCAA CCTAGACTTG AGGGCCCCCG CCGAGCTCCA CCGATCGAGG
CAAGCGCTTC TAACAGTCGT GGGGCAGATA CACAGGGTGT CTCTGAGGTT CGGCGTTTTG
GAGGTGGAGG GCGGGATGCT GAGGAGCTGG AGGGAGAAGC CCACCTTGGA ATACATAACG
TCAACAGGTA TTTACATAGT CTCCGAGGGG GTGGTGAAGA GGCTTGGGGA GGAGTACCTC
GACATGGACG CCCTCGCCCG GTCTCTGATC CCCAGAGTCG CCGTCTACGT GGCGAAGGAG
GCCTTCTTCT ACGACGTGGG CACCATCGAG GATCTGTCGA AGGCGCAGGA GGTTAAACTC
GACGGTTTAA AGCCGTAA
 
Protein sequence
MKAVVLAAGL GTRLRPLTFL VPKALATVGT KPLVDYVIEW LRLNGVREIA VVGYYMQDVL 
ERYLAQFHPD VVFLRSRKLL GTAGQLYYAR DWVDGDAAVV NTDVLTNLDL RAPAELHRSR
QALLTVVGQI HRVSLRFGVL EVEGGMLRSW REKPTLEYIT STGIYIVSEG VVKRLGEEYL
DMDALARSLI PRVAVYVAKE AFFYDVGTIE DLSKAQEVKL DGLKP