Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0062 |
Symbol | |
ID | 6164981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 47523 |
End bp | 51113 |
Gene Length | 3591 bp |
Protein Length | 1196 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641667227 |
Product | hypothetical protein |
Protein accession | YP_001793466 |
Protein GI | 171184547 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.631926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCTTG TATTAGCCTT GTTGGTCGCC GCGGCGCTTG TTCTCGCCGT GGAGACCCCC CATTTCTATG TGGTGGGCAA CGACACATAC TCCCAGAAGC TCGCCAATTA CCTTGAGGAG GCCTACGGGT TCTACGTCGG GAAAGGCCTC TCTCCTGCTC CGCCGTGTTC TGGCGGAAAG TACTTCGTCA ACATCACATC GGTGGCGTCC GGCGACACCC GGGTGGGCCT TTCGGGATCA ACTGTGTGCG TCCAGAGGCT TGACTTCAGC CAAAGCCTTA GCGACGTGGA GCTTAGACAT CTTGCCTACC ACGAGGTGGC GCACGTATTC CAGGTTAGGT ACATCAACCC AGACATGCTC TACGACCAGA GGTGGCCTGT GGAGGCCCTC CCCGAGGGCA TGGCGGCCGT GGGAGCCCAG TACTTCTACT TCCCCTACAG ATACTTCTCG GGCAAGCTCT ACCAGGTAAA TCCCTACTCC GCCTCCCACG ACGACTGGTA TAAATACAGC GCCGTCTTTG CCTGGTACCT CCAGAGCCTT GGGAACTGGA CTCCCGTGGT GGTAAACGCA ACGAGGGGCA ACGCCGACCC TGCCCTCGTC TCCATGTATG TGAAATTCCT CCTAGCTCTG GCACAAGGCG TCTCCATAGG CGGCGTGCAA CTGGCTCCCG ATTTTCAGAA GTACCAGCTG GCCCCCGGCT ACAACCCCCA GCCGCTCAGC CTAGACGGCC TCACCGCGGC CTACTACGAG ATCTCGCCAC CCTACCCCGG ATATCTCACA ATAGAGGCCG CCGGCGTTGT CTCCAACGTG CCTCTGGGCC AGCCCATCTG GGTCAACGGC ACGTTGAGGG TGGCCTTCGT CAACCCCACG ACGTCTCCCG TATACACCAC CGTGAAGATG TACTTCGGAG GGCTGTACGC TAAGTTCACG GGGGGCGCCT ACTACGACAA CGGGACCCTC GCGCTGGATC TCTACGTTGC TGTGGACGGG AGTCCCGCAA ACGGGGTGGT TTACATAAAC GGGACCGGCG TGACGGCCAG GGGCGGGTTT GCCACCTATG TCACAAGGGG GGCCCTAAGG CCTTACGCCC TGGTTGTGTC TAACGGTAGC TACACCACCG TCGTTAGGGT AAATCTGACG GGCCTCCAGC TGGCGGCGGC GCCGGGCGTG TTGCTGGTGG GGCCTGGGGC CTGGGGCGCC GTCAACGTCA CGGTCTACAA CCCCAACCCC CTCGTCGTTG TGGGGACGCT GAAGGCGGCT GGGTGCCCCG GCTTCGGGGG CGGCGCCGTT TTGCAGATTC CGCCGGGCGG TAGCGCCTTG GCTAAGCTAC CTTTCAACGT CTCCACGCCG GGCGACTGCC TCCTCTCTAT CTCCTACGCC GGCTCGACGG CAACGCTCTC CGTAAAGGCG GCGCGGCCCA CGTACAGGAT CTACTACGAC CTCGACAGGG GAGCCGGCGC TGTATACGCG ACTTTGGGGG GATACGCGGC GTCTGCCAAC TTCACCGGGC TCTCGACAAC GCTTAGGGTG CCGGGGGCCG GCTACACGGC GGCCACGTTA TCTATACGCC TGGCCGTGCC AGACTTCAAG ATCGACGTAA AGCCCGTGGG AGCCGGCGGG GGACTGCTAC AGTATTCCAT AACCGTCGTT GGATCCGTCT CCGGGACGCC GAACGCCACA TATCTCGCCA CAGTCGCCGT GGACGGCCGC GACGCCGGCA AAATCCGTAT AGATACAGGC CCAGCCGGCG TGGGTCAGTC CGCCCTCTCC GTGGCTTACG ACGCCCCGAT CGGTAAAAAC GCCGTCGACG TTAGGGTAGG CCAGGCGAAG TACACCCTTG CGCTTCCAAA GCCGCAGGTT AGGCTTGAGG TGGTCAAGGC GAGAGTCAAC GGCTCCGTCG TGGAGCTACT CCTCAAGCCT GTGACCAACT TCCCCGGCTT GAACATCACC GTGAGGGTAG ATGGCGGCGT TGGCTGCGCC TCCGTCTGCA TCCTCAAGGC TAGATACGAC GAGGTGATAA ACATCAGCTA CACGGCCGTC GAGCGGGGCT CCATATCGGT TAGGCTCCCG CGCCCCAGCT TCCGCATAGA CGTCTCCAGG GTGGTGGTAA CGCCCTCAAG CGTAGACGTG TCCCTGTCTA TAGAGGCGTC TATCTGCAAC CCCTCCGTCG ACGCGGACTA CTTTGTCTAT ATAAACGGGA CGGTCTTACA TATTCCAGCC GGCGCCGGTC TCTGCGCGAC GGGGAGGGCT ACGGCCGGCG CGTCGCTTCC CTACAGGGAG GATCTCAGGT TGACGCTTTC TACGAACTTC GGCGATGTGG AAAAGGTCAT CCACATCCCC AGGCCCACTG TGGCTGTCCG CTTGCTCAAC TGGCGTGTGG ACCGCGGTGG GGAGTCCGCC CTTCTCAACC TAACTATCTA CGCCCCGCCC AACTACACCT ACGTGGTCGG GGGGGATCAG GTGCGTGGGC GCCTCTCCAA GGTTGTAGAG GTCGCCGCCT CGGACGGGGC GGCCGTCTTT AGCTACGGAT TTGGGGAGGT GCGCATCCTC CGCCCACCCC TCAGGTTGAG CGCCGGCGCC GAGGCGGCCG AGTTGGGCAC GCCGGCTAGG GTTTTCGTTG CCGTTTCCAC GCCGCCGAAT CTAACCTTGA GAGTTCCCCT CTACGTCAAC GGGACGCAGA GCGTTTTTGT CGACGTGGGG CCGGGGGCAC ATGCCCAATA CGCCGTCAAC GTGACCTCCC CGGAGAGGCC CGGCAGATAC CTCGTGGTGC TTAAGGCGGG GCCGTACACT GTGTCTGTGC CGGTGCTGTG GTACAGGGTC TACAACCTAT CCATCTCGGG GCCGGCCGCG CTACCTCTGG GCGCCGGGGC GCGGGTGGTG CTTGGGGGGT TTGTGGAGCC CCGCGTGGCG GTCTCCGCGG TGGTCGAGGC TTGGGGCTGC GAGCAGTTCA GGAGGACGGT GCCGCTGAAC TACACCCTGG ATCTCGTCTA CAACAGAACC TGCGTCCTCC ATCTGGTCTT CCGGACCAAC TCCAGTCTTG TCTCCAGACG ACTCTACTGG GGGCCTCTGG AGGTGAGACC CGAGGCTCTG ATCCTCGGCA CAGCCGGGGG GCTTCCCGTG TTCGCCGCCG GCTCTCTATC CGCCGCGCTG TACCTAAACG GCTCTAGAGT CAACGGTAGC GTAGTGGTGG TGGGCCGCTA CGACGCGCTT GGCCTAGTGA ACTTCACCAT CTACGGCGAG TATATGGGAG TTAGGAACAA GACGGCCTTT GTGGGCTTCG CCGTGCCTCC CCAGAGCTAC ATCCGGGCCT CCGAAGCGGC CGGCAACATG TCGCAACGCG CCGCGGAGTA CTTCCGCTTC CTTGTGGAGA AGGCGGTGGC GACTGGGGAT TGGGCTCTTG TCGACGGCAT CTCCCAGCTC TATACGGCGC CGCCGACTCC AATGACTCTC CTGGCGCGGG CGTTGGTGGA GGGCGATCTG TCGGCGGGCC GGACGCCGAA TCTCGCTGTA GTTGAGACTC TCCGGCACAT AGAGCCAGCC ATATACGGTC TCCTGGGCCT CTCGATACTT GTGGCTAGGC GTTTTGCGTA G
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Protein sequence | MRLVLALLVA AALVLAVETP HFYVVGNDTY SQKLANYLEE AYGFYVGKGL SPAPPCSGGK YFVNITSVAS GDTRVGLSGS TVCVQRLDFS QSLSDVELRH LAYHEVAHVF QVRYINPDML YDQRWPVEAL PEGMAAVGAQ YFYFPYRYFS GKLYQVNPYS ASHDDWYKYS AVFAWYLQSL GNWTPVVVNA TRGNADPALV SMYVKFLLAL AQGVSIGGVQ LAPDFQKYQL APGYNPQPLS LDGLTAAYYE ISPPYPGYLT IEAAGVVSNV PLGQPIWVNG TLRVAFVNPT TSPVYTTVKM YFGGLYAKFT GGAYYDNGTL ALDLYVAVDG SPANGVVYIN GTGVTARGGF ATYVTRGALR PYALVVSNGS YTTVVRVNLT GLQLAAAPGV LLVGPGAWGA VNVTVYNPNP LVVVGTLKAA GCPGFGGGAV LQIPPGGSAL AKLPFNVSTP GDCLLSISYA GSTATLSVKA ARPTYRIYYD LDRGAGAVYA TLGGYAASAN FTGLSTTLRV PGAGYTAATL SIRLAVPDFK IDVKPVGAGG GLLQYSITVV GSVSGTPNAT YLATVAVDGR DAGKIRIDTG PAGVGQSALS VAYDAPIGKN AVDVRVGQAK YTLALPKPQV RLEVVKARVN GSVVELLLKP VTNFPGLNIT VRVDGGVGCA SVCILKARYD EVINISYTAV ERGSISVRLP RPSFRIDVSR VVVTPSSVDV SLSIEASICN PSVDADYFVY INGTVLHIPA GAGLCATGRA TAGASLPYRE DLRLTLSTNF GDVEKVIHIP RPTVAVRLLN WRVDRGGESA LLNLTIYAPP NYTYVVGGDQ VRGRLSKVVE VAASDGAAVF SYGFGEVRIL RPPLRLSAGA EAAELGTPAR VFVAVSTPPN LTLRVPLYVN GTQSVFVDVG PGAHAQYAVN VTSPERPGRY LVVLKAGPYT VSVPVLWYRV YNLSISGPAA LPLGAGARVV LGGFVEPRVA VSAVVEAWGC EQFRRTVPLN YTLDLVYNRT CVLHLVFRTN SSLVSRRLYW GPLEVRPEAL ILGTAGGLPV FAAGSLSAAL YLNGSRVNGS VVVVGRYDAL GLVNFTIYGE YMGVRNKTAF VGFAVPPQSY IRASEAAGNM SQRAAEYFRF LVEKAVATGD WALVDGISQL YTAPPTPMTL LARALVEGDL SAGRTPNLAV VETLRHIEPA IYGLLGLSIL VARRFA
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