Gene Tneu_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0056 
Symbol 
ID6165598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp40423 
End bp41874 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content60% 
IMG OID641667221 
Productserine/threonine protein kinase 
Protein accessionYP_001793460 
Protein GI171184541 
COG category[T] Signal transduction mechanisms
[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0129993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAGCC TGCTGTGGAC GCTACCAGCC ATCTTAGCCG CCGTGGCCGG CTGGAGATTC 
TACAGACACA GTGTCGCCCT CCTGTGGCTA ACCGCGGCAT CTTCCCTGGC TTTCCTCTTC
CCAGAGGGCG CCGCGTTGTT CGTGAACTCG CTCGTCGTCG CGGCCGTGGC GGCGAGGGCC
ATATTCGACC GATTCAGGAA GCCGATAACT GCCGTGTTTA TAGTTGCGGT TGTCGCAAAG
CTCTACATAT TCACCGAGTA CTACCTCGAC GAGCGGCTGA GCTACGTCTA CTATATAGCA
GACGGCGTAT TTACCGGGCT GTCCGCGTTC CTCCTGCTGG CCTACACGTT CAAGCCGCCG
AGGGTTGGGG AAGCCCTCTG GCTGTTGCTC CCCGCCTCCG CGCTGTCTTC CACCTACACG
CTGGCGGTGC AGCCGCTCGC AGGCGCCGTC CTAGCGCTGG CTGACGCACG TCCGCTGTAC
GTAGCCGCCG CCGCGGCGGC CAACCTCTAC CTCCTCTTCA CCTCGGGCGA CCCCCTGCCG
GCTCTCCCGG CCTCCCTCCT CGTGCTCGCC TACGTATTCA CACACAAGAG GGTGACGTAC
CTCTCGCCTC AGTCCCCCGT TGGGTGGCTC CACGCGTGGC TGGGCGGTAG GTACAAGGTG
GTCCGGCTCC TCGGGGTAGG CGGGTTTAGC TATGTTTTGG CCGTCAAACA GAGGGGGGCC
CTATACGCCG CCAAGATACT GCGCTACGTA GACGACTACG GAAGCCCACT CGCCGGAGAT
GAAAACATCT TGCGCATCTT TGGGCAAGAG ATGCAGAGGT ACCTAGAGAT AAAGTCGGAC
CACGTGGTTA AGGCCTACGA GGTATATCTA CCCGCCGTGG GCTACAGAGA TGTGGCTCAA
TATATGAGGA ACCCGCCGTA TATCCTGCTT GAGTATATGG AGGGGGGGAC CCTCAGAGAT
CTACTGAGGG CTAGGAAGAG GCTATCTATC CCGGAGGCGG TGGAGCTGTT TAGACAGCTG
GCGCGGGGGC TCCACGACAT ACATAAACAC AGCGTGGCCC ACCTCGACAT AAAGCCCGAG
AACATCATGT TCACGGGGGA TAGAAAAACG GCGAAGATAG GCGATATGGG AATCGCCAAG
GTGGTAAGCG GGGAGTACGT GCGGAGTAGC TACATGTCCC CCGCCTATGC GGCCCCGGAG
GTTAAAAAAG GCGCGGCGTC TCTGGCGTCC GACGTGTACT CCCTCGGCTG CGTCATGTAT
GAGGCGTTGA CCGGGATAAA CCCAAACGTC TTCGTCGAAA ACGGCTACAG AGTGCCGCCC
CCAAGCGCCT ACAACCCAGA GGTGCCGCCG TGGCTCGACG AGCTTCTGCT TAAGATGCTC
GACGTAGACC CCGCCAGAAG GCCAAGCGCC TCGGAGTTAA ACACCTTTTT AAACCGCCTC
TCCGGGGGCT GA
 
Protein sequence
MLSLLWTLPA ILAAVAGWRF YRHSVALLWL TAASSLAFLF PEGAALFVNS LVVAAVAARA 
IFDRFRKPIT AVFIVAVVAK LYIFTEYYLD ERLSYVYYIA DGVFTGLSAF LLLAYTFKPP
RVGEALWLLL PASALSSTYT LAVQPLAGAV LALADARPLY VAAAAAANLY LLFTSGDPLP
ALPASLLVLA YVFTHKRVTY LSPQSPVGWL HAWLGGRYKV VRLLGVGGFS YVLAVKQRGA
LYAAKILRYV DDYGSPLAGD ENILRIFGQE MQRYLEIKSD HVVKAYEVYL PAVGYRDVAQ
YMRNPPYILL EYMEGGTLRD LLRARKRLSI PEAVELFRQL ARGLHDIHKH SVAHLDIKPE
NIMFTGDRKT AKIGDMGIAK VVSGEYVRSS YMSPAYAAPE VKKGAASLAS DVYSLGCVMY
EALTGINPNV FVENGYRVPP PSAYNPEVPP WLDELLLKML DVDPARRPSA SELNTFLNRL
SGG