Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0048 |
Symbol | |
ID | 6164561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 34070 |
End bp | 35134 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641667213 |
Product | isopentenyl pyrophosphate isomerase |
Protein accession | YP_001793452 |
Protein GI | 171184533 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0360256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATTG ACAGGCGGAA AAACGACCAC ATTTATCTGG CGAGCTCCGA GATTTCTCAA GTGGGCTCCC CCTGGTTCGA CGAGGTAATC CTAATCCACA ACGCCCTGCC CGAGCTAGAT CTGTCGGAGG TAGACACCAC TGCCAAGTTC CTGGGGGCCG AGGTCAAGGC GCCGTTTGGA ATCGGCGCTA TGACCGGCGG GACTGAGCTA GCTGGGAAGA TAAACGCGGA GTTGGCCAAA GCCGCCGAGG CGTTTGGGAT CCCGATATAC GTCGGCTCCC AGAGGATCGC GTTGGTTAAG CCAGAGGTGC GCTGGACCTT CGAGGTTGTT AAGAAGAACG CCCCAACTGT GCCGAAGGTG GCGAACTTGG GGGCGCCCCA GCTTGTGGAA CTCGACGAGG TTAAGCTGGC CGAGTGGGTT TCGCAGGCGG TAGACATGGT CGACGCGCAC GCGGTGGCTA TCCACCTAAA CGCCGCCCAG GAGGCTGTCC AGCCGGAGGG CGAGCCCCGC TTCAGGGGGG TGCTGGAGAA GATCAAGGTG GTGAAAAGGG CGGCCGGCAG GCCGCTTATT GTAAAAGAGG TTGGCAACGG CATATCTAGG GAGGTGGCCG CACGCCTCGC GGGGGTTGCG GACGCCATCG ACGTGGGGGG CTACGGGGGG ACCTCCTTCA TAGCGATAGA GGGGGCTAGA GCGGCCGGCG CCGGGGCCCA GCTTCGGCGG AGGATCGCCG AGACGTTTAA GCTGTGGGGG ATACCCACCG CGGCTTCGAT ATGTGAGGCG AAGTCCGGCT ACGGGGGCTA CATAATCGCC TCGGGGGGCA TCAGAAGCGG GCTCGACGGC GTGAAGGCGT TGGCGCTAGG CGCCAGCTTC TTCACCATGT CGCAACCTCT TCTAAAGGCG GCTCTGGAGG GGAGGCTGAA GGAGGAGATA GAGACCGTCG TAGCCGAGGT GAAGACGGCC ATGTTTCTCA TAGGCGCTAG GACTGTCAAA GATATCGCGT CGGCGCCTCG GGTCTACGGC CCGCGTCTGA GAAGCTGGCT GGAGCAGAGG GGGCTCACTT GTTAA
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Protein sequence | MEIDRRKNDH IYLASSEISQ VGSPWFDEVI LIHNALPELD LSEVDTTAKF LGAEVKAPFG IGAMTGGTEL AGKINAELAK AAEAFGIPIY VGSQRIALVK PEVRWTFEVV KKNAPTVPKV ANLGAPQLVE LDEVKLAEWV SQAVDMVDAH AVAIHLNAAQ EAVQPEGEPR FRGVLEKIKV VKRAAGRPLI VKEVGNGISR EVAARLAGVA DAIDVGGYGG TSFIAIEGAR AAGAGAQLRR RIAETFKLWG IPTAASICEA KSGYGGYIIA SGGIRSGLDG VKALALGASF FTMSQPLLKA ALEGRLKEEI ETVVAEVKTA MFLIGARTVK DIASAPRVYG PRLRSWLEQR GLTC
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