| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0044 |
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| Symbol | |
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| ID | 6164823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 30789 |
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| End bp | 31568 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641667209 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001793448 |
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| Protein GI | 171184529 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0333473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAGG GCAAGGTATC TATAGTCACC GCGGCGAGCA GAGGGATAGG ACGCGGCGTT
GCCTCCGTTC TCGCGAGGGA GGGCTCAGAC CTCGTAATCG CGGCTAGAGA CTGGGGGCGT
CTAAAGGAGG TGGCTGAGGA GCTCTCTTCA CAACACGGCG TCTCGGTGGT GCCGGTCGCC
GCCGATTTGA CAAAGAGGGA GGACGTCAAG AGGATAGTTG AGACGGCCGT GAAACAGTTC
GGCAAAGTGG ATGTTCTGGT GTACAACACG GGGCCGCCTA AGCCGGGGAC CTTCCTAGAG
CTTACCGAGG AGGACTGGGA TTACGGCGTG AGGCTACTGC TCATGAGCGC TGTGTGGATA
ACAAGAGACG TCCTCCCACA TATGGTGGAG AGGAGGCAGG GCAGGCTCAT ATACATAACA
TCCAGCACTC TGAAACAGCC TATACCGACC CTCACCCTCT CCAACGTCGT CAGGATATCT
CTCGCGGGTC TTGTAAAAAC CCTGGCTTAC CAGCTGGGGA GGTACAACAT CCTCGTGAAC
GGCATAATGC AGGGCTACGT CGACACTGAC CGGGTGAGGG AGGTGGCGGC AGCCAGAGCC
CAGAGGGAGG GGCGCACCGT CGAGGATATA CTAGAGGAGA TGGGGCGGGA AATCCCGTTG
GGTAGGCTGG CGAAGCCCGA GGAGATAGGC GAGCTCGTCG CCTTCCTCGC CTCCGAGCGG
GCTAGCTACA TCACGGGTTC CCTTATCCTG ATAGACGGCG GGCGCACCTT ATGTATTTAG
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| Protein sequence | MLKGKVSIVT AASRGIGRGV ASVLAREGSD LVIAARDWGR LKEVAEELSS QHGVSVVPVA
ADLTKREDVK RIVETAVKQF GKVDVLVYNT GPPKPGTFLE LTEEDWDYGV RLLLMSAVWI
TRDVLPHMVE RRQGRLIYIT SSTLKQPIPT LTLSNVVRIS LAGLVKTLAY QLGRYNILVN
GIMQGYVDTD RVREVAAARA QREGRTVEDI LEEMGREIPL GRLAKPEEIG ELVAFLASER
ASYITGSLIL IDGGRTLCI
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