Gene Tneu_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0044 
Symbol 
ID6164823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp30789 
End bp31568 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID641667209 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001793448 
Protein GI171184529 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[I] Lipid transport and metabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0333473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAGG GCAAGGTATC TATAGTCACC GCGGCGAGCA GAGGGATAGG ACGCGGCGTT 
GCCTCCGTTC TCGCGAGGGA GGGCTCAGAC CTCGTAATCG CGGCTAGAGA CTGGGGGCGT
CTAAAGGAGG TGGCTGAGGA GCTCTCTTCA CAACACGGCG TCTCGGTGGT GCCGGTCGCC
GCCGATTTGA CAAAGAGGGA GGACGTCAAG AGGATAGTTG AGACGGCCGT GAAACAGTTC
GGCAAAGTGG ATGTTCTGGT GTACAACACG GGGCCGCCTA AGCCGGGGAC CTTCCTAGAG
CTTACCGAGG AGGACTGGGA TTACGGCGTG AGGCTACTGC TCATGAGCGC TGTGTGGATA
ACAAGAGACG TCCTCCCACA TATGGTGGAG AGGAGGCAGG GCAGGCTCAT ATACATAACA
TCCAGCACTC TGAAACAGCC TATACCGACC CTCACCCTCT CCAACGTCGT CAGGATATCT
CTCGCGGGTC TTGTAAAAAC CCTGGCTTAC CAGCTGGGGA GGTACAACAT CCTCGTGAAC
GGCATAATGC AGGGCTACGT CGACACTGAC CGGGTGAGGG AGGTGGCGGC AGCCAGAGCC
CAGAGGGAGG GGCGCACCGT CGAGGATATA CTAGAGGAGA TGGGGCGGGA AATCCCGTTG
GGTAGGCTGG CGAAGCCCGA GGAGATAGGC GAGCTCGTCG CCTTCCTCGC CTCCGAGCGG
GCTAGCTACA TCACGGGTTC CCTTATCCTG ATAGACGGCG GGCGCACCTT ATGTATTTAG
 
Protein sequence
MLKGKVSIVT AASRGIGRGV ASVLAREGSD LVIAARDWGR LKEVAEELSS QHGVSVVPVA 
ADLTKREDVK RIVETAVKQF GKVDVLVYNT GPPKPGTFLE LTEEDWDYGV RLLLMSAVWI
TRDVLPHMVE RRQGRLIYIT SSTLKQPIPT LTLSNVVRIS LAGLVKTLAY QLGRYNILVN
GIMQGYVDTD RVREVAAARA QREGRTVEDI LEEMGREIPL GRLAKPEEIG ELVAFLASER
ASYITGSLIL IDGGRTLCI